RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ITM2AO43736 263 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 BMP2P12643 396 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 CBR1P16152 277 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 CREB1P16220 341 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 IL7RP16871 459 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 HNF1AP20823 631 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 S100A3P33764 101 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 RIN1Q13671 783 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 SYPL1Q16563 259 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 WDR93Q6P2C0 686 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 KLHL24Q6TFL4 600 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 NHLRC1Q6VVB1 395 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 RNF130Q86XS8 419 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 PEX5LQ8IYB4 626 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF786Q8N393 782 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 ADPRHL1Q8NDY3 354 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 OR6S1Q8NH40 331 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 WDR60Q8WVS4 1066 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 TEX37Q96LM6 180 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 FOXN4Q96NZ1 517 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 C19orf24Q9BVV8 132 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 DENND2DQ9H6A0 471 aaPredicted RBP9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 AIG1Q9NVV5 245 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 MOKQ9UQ07 419 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 CHST2Q9Y4C5 530 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 ATP23Q9Y6H3 246 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 LOC100289279A0A1B0GTE1 492 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 A0A1W2PR80 420 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM129A0AVI4 362 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF587BE7ETH6 402 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 FRS3O43559 492 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 LILRA1O75019 489 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 SPAG7O75391 227 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 STAMBPO95630 424 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 KRT75O95678 551 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 IL6P05231 212 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 IGFBP1P08833 259 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 ALDOCP09972 364 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF16P17020 682 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 CXCR1P25024 350 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 ARR3P36575 388 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 MRPL19P49406 292 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 MRPS11P82912 194 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 CEACAM7Q14002 265 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 LIN52Q52LA3 116 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 GPAT3Q53EU6 434 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 HIKESHIQ53FT3 197 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 LIPNQ5VXI9 398 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 SPATA19Q7Z5L4 167 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 NET1Q7Z628 596 aaPredicted RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 MAELQ96JY0 434 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 LRR1Q96L50 414 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 ANKRD27Q96NW4 1050 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 PANX1Q96RD7 426 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 PTDSS2Q9BVG9 487 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 RAB1BQ9H0U4 201 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 B3GAT1Q9P2W7 334 aa9.73□□□□□ -0.85
CLSTN3-206ENST00000535668 A0A0G2JPF8 293 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 VSTM5A8MXK1 200 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 HNRNPCL2B2RXH8 293 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 HNRNPCL3B7ZW38 293 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 HNRNPCL1O60812 293 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 AKR7A3O95154 331 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 CPSF4O95639 269 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 C1QCP02747 245 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 OR4A8P0C604 315 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 CECR9P0C854 216 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 HNRNPCL4P0DMR1 293 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 APEHP13798 732 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 IL12AP29459 219 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 CHI3L1P36222 383 aaPredicted RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 CRISP3P54108 245 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC18A1P54219 525 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 HGFACQ04756 655 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 EGR4Q05215 589 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 PDCD2Q16342 344 aaPredicted RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM225Q6GV28 225 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 LINGO2Q7L985 606 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 MEX3DQ86XN8 651 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 ARIH2OSQ8N7S6 290 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC38A5Q8WUX1 472 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 FBXO17Q96EF6 278 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 AURKBQ96GD4 344 aaPredicted RBP9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC41A3Q96GZ6 507 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF75AQ96N20 296 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 SPATA9Q9BWV2 254 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 C1QTNF6Q9BXI9 259 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 B3GNT2Q9NY97 397 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 IFT52Q9Y366 437 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 PCDHB14Q9Y5E9 798 aa9.72□□□□□ -0.85
CLSTN3-206ENST00000535668 SDHDO14521 159 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 OR2T1O43869 369 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 SNNO75324 88 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 LY6HO94772 140 aa9.71□□□□□ -0.86
CLSTN3-206ENST00000535668 C8BP07358 591 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms