RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	EMC7	Q9NPA0	242 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SERINC1	Q9NRX5	453 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	GID8	Q9NWU2	228 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ASIC5	Q9NY37	505 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	EMC3	Q9P0I2	261 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	PRDM4	Q9UKN5	801 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC25A15	Q9Y619	301 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	NPIPA5	A0A0B4J1W7	369 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647		E7EQL1	145 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NPIPA7	E9PJI5	369 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	GPR171	O14626	319 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	PHF1	O43189	567 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	DNPH1	O43598	174 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	MGRN1	O60291	552 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATP6V1G2	O95670	118 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	AK1	P00568	194 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NPIPA8	P0DM63	369 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	G6PD	P11413	515 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	PRPS1L1	P21108	318 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	APOBEC1	P41238	236 aa	Known RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	CLK1	P49759	484 aa	Known RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NUDT6	P53370	316 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC16A1	P53985	500 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	SESN3	P58005	492 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	TP53BP2	Q13625	1128 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	RAB35	Q15286	201 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	SNCB	Q16143	134 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	TRMT5	Q32P41	509 aa	Known RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NDUFAF6	Q330K2	333 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	COQ5	Q5HYK3	327 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	C1orf146	Q5VVC0	180 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	ABLIM2	Q6H8Q1	611 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR7E24	Q6IFN5	339 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	KLHL17	Q6TDP4	642 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	CLEC2A	Q6UVW9	174 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	HACD2	Q6Y1H2	254 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NET1	Q7Z628	596 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR9I1	Q8NGQ6	314 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMEM234	Q8WY98	164 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	PROX1	Q92786	737 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	STMN2	Q93045	179 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	ROPN1L	Q96C74	230 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	SPDL1	Q96EA4	605 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	MPP4	Q96JB8	637 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR5B2	Q96R09	309 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR7D2	Q96RA2	312 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	THUMPD3	Q9BV44	507 aa	Known RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	CACNG6	Q9BXT2	260 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	DPY30	Q9C005	99 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	ACER3	Q9NUN7	267 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	LPAR3	Q9UBY5	353 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	MALT1	Q9UDY8	824 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	KCNE5	Q9UJ90	142 aa		10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	LEF1	Q9UJU2	399 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNND1-238	ENST00000534647	NBEAL1	Q6ZS30	2694 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ZNF716	A6NP11	495 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647		C9JVG2	144 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	SULT2B1	O00204	365 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ANKRD28	O15084	1053 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	STX11	O75558	287 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	STAMBP	O95630	424 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PMS2P2	O95744	297 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	C6orf47	O95873	294 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	RHCE	P18577	417 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PGC	P20142	388 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	CD40	P25942	277 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	CLNS1A	P54105	237 aa	Known RBP	10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PSME3	P61289	254 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	UFM1	P61960	85 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PTGR1	Q14914	329 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ARHGAP11B	Q3KRB8	267 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	SPDYE7P	Q495Y7	208 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	SYT14P1	Q58G82	188 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PDZK1	Q5T2W1	519 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	FUNDC1	Q8IVP5	155 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	FBXL14	Q8N1E6	418 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	MUC15	Q8N387	334 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	GLB1L3	Q8NCI6	653 aa	Predicted RBP	10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	FAM71C	Q8NEG0	241 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	MIPOL1	Q8TD10	442 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	APH1A	Q96BI3	265 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ZNF775	Q96BV0	537 aa	Predicted RBP	10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	AMBRA1	Q9C0C7	1298 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	QRSL1	Q9H0R6	528 aa	Known RBP	10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ASB6	Q9NWX5	421 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	TAS2R16	Q9NYV7	291 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	ADA2	Q9NZK5	511 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	TRAPPC4	Q9Y296	219 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	HDGFL3	Q9Y3E1	203 aa		10.14	□□□□□ -0.79
CTNND1-238	ENST00000534647	PRAMEF27	A3QJZ7	478 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	PDLIM1	O00151	329 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	FBP2	O00757	339 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	FCMR	O60667	390 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	UGT2B17	O75795	530 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	PDE5A	O76074	875 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	CSTA	P01040	98 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	CSF3	P09919	207 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	BMP4	P12644	408 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	PTN	P21246	168 aa		10.13	□□□□□ -0.79
CTNND1-238	ENST00000534647	NTF4	P34130	210 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms