RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	IGHV3-9	P01782	118 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	THY1	P04216	161 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	IGHV1-2	P23083	117 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	GSK3B	P49841	420 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	PSME3	P61289	254 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	SELENOW	P63302	87 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	MFSD13A	Q14CX5	517 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	POU4F3	Q15319	338 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	CYBRD1	Q53TN4	286 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	CASP12	Q6UXS9	341 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	UBE2J2	Q8N2K1	259 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	ANKS4B	Q8N8V4	417 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	NRGN	Q92686	78 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	TMEM45B	Q96B21	275 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	ZNF385A	Q96PM9	386 aa	Known RBP	12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	ASB6	Q9NWX5	421 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	FAM53C	Q9NYF3	392 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	ABCD2	Q9UBJ2	740 aa		12.83	□□□□□ -0.36
CTSB-231	ENST00000534382	LRBA	P50851	2863 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382		M0R082	166 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	GSTA4	O15217	222 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	LYZL6	O75951	148 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	LYPD3	O95274	346 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	TNFRSF1B	P20333	461 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	COX5A	P20674	150 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	CREB3L2	Q70SY1	520 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	H1FNT	Q75WM6	255 aa	Predicted RBP	12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	AAED1	Q7RTV5	226 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	ZNF417	Q8TAU3	575 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	LZIC	Q8WZA0	190 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	HSD17B8	Q92506	261 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	PIK3IP1	Q96FE7	263 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	TPD52L3	Q96J77	140 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	MPP4	Q96JB8	637 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	OXGR1	Q96P68	337 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	KCTD14	Q9BQ13	255 aa	Predicted RBP	12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	PLEKHF2	Q9H8W4	249 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	SPAG4	Q9NPE6	437 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	SEC14L4	Q9UDX3	406 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	MALT1	Q9UDY8	824 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	TAGLN3	Q9UI15	199 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	SLC7A7	Q9UM01	511 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	B3GALT5	Q9Y2C3	310 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	CSMD2	Q7Z408	3487 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	AKAP6	Q13023	2319 aa		12.82	□□□□□ -0.36
CTSB-231	ENST00000534382	PDZD2	O15018	2839 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	CSMD1	Q96PZ7	3565 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	LOC102725191	A0A1B0GVB3	256 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	CXCR6	O00574	342 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	KLF4	O43474	513 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	SHOX2	O60902	331 aa	Predicted RBP	12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	FAM107A	O95990	144 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	BGLAP	P02818	100 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	ZNF43	P17038	809 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	PTN	P21246	168 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	CBL	P22681	906 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	GRPR	P30550	384 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	DNAJA1	P31689	397 aa	Known RBP	12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	OR1E2	P47887	323 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	LTB	Q06643	244 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	FAP	Q12884	760 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	BEX5	Q5H9J7	111 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	TSPO2	Q5TGU0	170 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	TTC33	Q6PID6	262 aa	Predicted RBP	12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	WDR88	Q6ZMY6	472 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	DEF8	Q6ZN54	512 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	WFDC8	Q8IUA0	241 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	EPHX4	Q8IUS5	362 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	KDM8	Q8N371	416 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	PIP4P2	Q8N4L2	257 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	ADPRHL1	Q8NDY3	354 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	SLC41A3	Q96GZ6	507 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	POLR2J2	Q9GZM3	115 aa	Known RBP	12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	POLR2J3	Q9H1A7	115 aa	Known RBP	12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	LIME1	Q9H400	295 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	SLC7A10	Q9NS82	523 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	ARL8B	Q9NVJ2	186 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	UPB1	Q9UBR1	384 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	EDAR	Q9UNE0	448 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	CORIN	Q9Y5Q5	1042 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	TACC2	O95359	2948 aa		12.81	□□□□□ -0.36
CTSB-231	ENST00000534382	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	12.8	□□□□□ -0.36
CTSB-231	ENST00000534382		A0A1W2PPR1	153 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	CIB4	A0PJX0	185 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	MT-ATP6	P00846	226 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	GGT1	P19440	569 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	LOX	P28300	417 aa	Predicted RBP	12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	TAS2R41	P59536	307 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	C1D	Q13901	141 aa	Known RBP	12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	TAB1	Q15750	504 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	GKAP1	Q5VSY0	366 aa	Predicted RBP	12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	ALKBH2	Q6NS38	261 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	P2RY8	Q86VZ1	359 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	C10orf53	Q8N6V4	93 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	SCAI	Q8N9R8	606 aa		12.8	□□□□□ -0.36
CTSB-231	ENST00000534382	POMGNT2	Q8NAT1	580 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms