RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CLNS1AP54105 237 aaKnown RBP18.49■□□□□ 0.55
SSH3-211ENST00000534112 HGFACQ04756 655 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 BNIP2Q12982 314 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 FAM174BQ3ZCQ3 159 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 EPHX4Q8IUS5 362 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 ZNF440Q8IYI8 595 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 ZCCHC24Q8N2G6 241 aaKnown RBP18.49■□□□□ 0.55
SSH3-211ENST00000534112 FAM169BQ8N8A8 192 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 NUP37Q8NFH4 326 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 HPS1Q92902 700 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 DOK1Q99704 481 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 TAPBPLQ9BX59 468 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 PRDM4Q9UKN5 801 aa18.49■□□□□ 0.55
SSH3-211ENST00000534112 A8MVM7 634 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 E9PBE3 544 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 hCG_2039718K7EN88 272 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 MYZAPP0CAP1 466 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 NR2F1P10589 423 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 HOXB1P14653 301 aaPredicted RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 APEX1P27695 318 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 SRP14P37108 136 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 ACAA2P42765 397 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 ANXA11P50995 505 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 TXNL4AP83876 142 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 NIPAL3Q6P499 406 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 PEX5LQ8IYB4 626 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 TRIML2Q8N7C3 387 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 LINC01356Q8N9X3 169 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 NEU4Q8WWR8 484 aaPredicted RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 PKNOX2Q96KN3 472 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 NELFAQ9H3P2 528 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 ZNF442Q9H7R0 627 aa18.48■□□□□ 0.55
SSH3-211ENST00000534112 MOV10Q9HCE1 1003 aaKnown RBP18.48■□□□□ 0.55
SSH3-211ENST00000534112 CDHR4A6H8M9 788 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 VSTM5A8MXK1 200 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 TYROBPO43914 113 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 SNUPNO95149 360 aaKnown RBP18.47■□□□□ 0.55
SSH3-211ENST00000534112 IGKV3-15P01624 115 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 ERCC1P07992 297 aaPredicted RBP18.47■□□□□ 0.55
SSH3-211ENST00000534112 ITGA2P17301 1181 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 THBS4P35443 961 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 COX20Q5RI15 118 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 PRAMEF8Q5VWM4 474 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 PRAMEF7Q5VXH5 474 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 WBP2NLQ6ICG8 309 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 ZNF786Q8N393 782 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 CADM2Q8N3J6 435 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 SVOPLQ8N434 492 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 AENQ8WTP8 325 aaKnown RBP18.47■□□□□ 0.55
SSH3-211ENST00000534112 TEX37Q96LM6 180 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 PANX1Q96RD7 426 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 SNX18Q96RF0 628 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 C20orf27Q9GZN8 174 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 RASD1Q9Y272 281 aa18.47■□□□□ 0.55
SSH3-211ENST00000534112 TMEM129A0AVI4 362 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 WDR91A4D1P6 747 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 FRS3O43559 492 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 SERPINE1P05121 402 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 CELA3BP08861 270 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 CBR1P16152 277 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 LBPP18428 481 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 NPR2P20594 1047 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 CDKN2CP42773 168 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 ABCE1P61221 599 aaKnown RBP18.46■□□□□ 0.55
SSH3-211ENST00000534112 COPZ1P61923 177 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 ROR2Q01974 943 aaKnown RBP18.46■□□□□ 0.55
SSH3-211ENST00000534112 IFFO1Q0D2I5 559 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 MAPK11Q15759 364 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 C1orf140Q5VVS0 124 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 ZNF621Q6ZSS3 439 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 SPATA21Q7Z572 469 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 MEX3DQ86XN8 651 aaKnown RBP18.46■□□□□ 0.55
SSH3-211ENST00000534112 VRK2Q86Y07 508 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 ANKRD27Q96NW4 1050 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 PARD6BQ9BYG5 372 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 LINC00470Q9BZP3 86 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 RAP2CQ9Y3L5 183 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 PCDHB14Q9Y5E9 798 aa18.46■□□□□ 0.55
SSH3-211ENST00000534112 TMEM229AB2RXF0 380 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 NPIPB7O75200 414 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 GSNP06396 782 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 TFPTP0C1Z6 253 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 RPL14P50914 215 aaKnown RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 CDH15P55291 814 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 SH3BGRP55822 239 aaPredicted RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 NME5P56597 212 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 UFM1P61960 85 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 RUNX1T1Q06455 604 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 RIN1Q13671 783 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 CHI3L2Q15782 390 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 MYPOPQ86VE0 399 aaPredicted RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 OR52P1PQ8NH57 321 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 PNPT1Q8TCS8 783 aaKnown RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 UBASH3BQ8TF42 649 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 NUF2Q9BZD4 464 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 ROPN1BQ9BZX4 212 aaPredicted RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 ROPN1Q9HAT0 212 aaPredicted RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
SSH3-211ENST00000534112 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.45■□□□□ 0.54
SSH3-211ENST00000534112 SH3PXD2BA1X283 911 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms