RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TMEM225Q6GV28 225 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 LIX1LQ8IVB5 337 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 TUSC5Q8IXB3 177 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 PFN4Q8NHR9 129 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF417Q8TAU3 575 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 CANT1Q8WVQ1 401 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 SGTBQ96EQ0 304 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF587Q96SQ5 575 aaPredicted RBP19.86■□□□□ 0.77
LRRK1-208ENST00000532029 CHST11Q9NPF2 352 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 MEPEQ9NQ76 525 aaPredicted RBP19.86■□□□□ 0.77
LRRK1-208ENST00000532029 EMC3Q9P0I2 261 aa19.86■□□□□ 0.77
LRRK1-208ENST00000532029 TCRBV3S1A0A5B6 114 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 HTR3EA5X5Y0 456 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 LRRN3E7EW58 273 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 GPR171O14626 319 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 RAMP1O60894 148 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 FZD7O75084 574 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 TNFSF13O75888 250 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 VAMP5O95183 116 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 GADD45GO95257 159 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 YES1P07947 543 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 NQO1P15559 274 aaKnown RBP19.85■□□□□ 0.77
LRRK1-208ENST00000532029 FUT4P22083 530 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 AGTR1P30556 359 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 KIR2DL2P43627 348 aaPredicted RBP19.85■□□□□ 0.77
LRRK1-208ENST00000532029 ERFP50548 548 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 GUSBP1Q15486 140 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 H1FNTQ75WM6 255 aaPredicted RBP19.85■□□□□ 0.77
LRRK1-208ENST00000532029 RNF113BQ8IZP6 322 aaKnown RBP19.85■□□□□ 0.77
LRRK1-208ENST00000532029 SCAIQ8N9R8 606 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 OR6K3Q8NGY3 331 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 OR52J3Q8NH60 311 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 DHRS1Q96LJ7 313 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 MOGAT1Q96PD6 335 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 PIGMQ9H3S5 423 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 FKRPQ9H9S5 495 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 BCO1Q9HAY6 547 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 NANSQ9NR45 359 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 RASD1Q9Y272 281 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 B3GALT5Q9Y2C3 310 aa19.85■□□□□ 0.77
LRRK1-208ENST00000532029 DOCK7Q96N67 2140 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 NCOA6Q14686 2063 aaPredicted RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 A0A087WUU8 490 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF724A8MTY0 619 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 EEF1E1-BLOC1S5C9J1V9 151 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 EEF1E1O43324 174 aaKnown RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 PIP5K1CO60331 668 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 IGF2P01344 180 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 HIST1H2ABP04908 130 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 IFI30P13284 250 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 RRM2P31350 389 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 IL1RL1Q01638 556 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 PMS2P3Q13401 168 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 VWA1Q6PCB0 445 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 PODNL1Q6PEZ8 512 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 MBOAT2Q6ZWT7 520 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 HIST3H2AQ7L7L0 130 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 GPAT4Q86UL3 456 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 NRMQ8IXM6 262 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 CDK20Q8IZL9 346 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 RELL2Q8NC24 303 aaPredicted RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 SLC7A13Q8TCU3 470 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 HIST1H2ACQ93077 130 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 UTP4Q969X6 686 aaKnown RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 RAB3IPQ96QF0 476 aaPredicted RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 SF3B5Q9BWJ5 86 aaKnown RBP19.84■□□□□ 0.77
LRRK1-208ENST00000532029 CHID1Q9BWS9 393 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 YY1AP1Q9H869 796 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 KCNJ16Q9NPI9 418 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF229Q9UJW7 825 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 PROCRQ9UNN8 238 aa19.84■□□□□ 0.77
LRRK1-208ENST00000532029 IGKV3D-15A0A087WSY6 115 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF716A6NP11 495 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 SMNDC1O75940 238 aaKnown RBP eCLIP19.83■□□□□ 0.77
LRRK1-208ENST00000532029 OR7A10O76100 309 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 SLC16A1P53985 500 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 BTLAQ7Z6A9 289 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 GALNT5Q7Z7M9 940 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 ADPRHL1Q8NDY3 354 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 OR5J2Q8NH18 312 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 ZNF775Q96BV0 537 aaPredicted RBP19.83■□□□□ 0.77
LRRK1-208ENST00000532029 STARD4Q96DR4 205 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 BPIFA2Q96DR5 249 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 UCK2Q9BZX2 261 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 KRCC1Q9NPI7 259 aaPredicted RBP19.83■□□□□ 0.77
LRRK1-208ENST00000532029 C20orf141Q9NUB4 165 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 MRPL39Q9NYK5 338 aaKnown RBP19.83■□□□□ 0.77
LRRK1-208ENST00000532029 SEC14L4Q9UDX3 406 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 ING1Q9UK53 422 aaPredicted RBP19.83■□□□□ 0.77
LRRK1-208ENST00000532029 TMCC3Q9ULS5 477 aa19.83■□□□□ 0.77
LRRK1-208ENST00000532029 RELNP78509 3460 aa19.83■□□□□ 0.76
LRRK1-208ENST00000532029 TRBV4-1A0A0J9YWV2 114 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 KRT36O76013 467 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 OR6A2O95222 327 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 FUT1P19526 365 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 P2RY4P51582 365 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 SLC17A1Q14916 467 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 CDSNQ15517 529 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 ZSCAN26Q16670 478 aa19.82■□□□□ 0.76
LRRK1-208ENST00000532029 OR2T5Q6IEZ7 315 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms