RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZGLP1P0C6A0 271 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 BTCP35070 178 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 CTBP2P56545 445 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 CSTF1Q05048 431 aaKnown RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 RAB40BQ12829 278 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 NTRK2Q16620 822 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 EXOSC6Q5RKV6 272 aaKnown RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 SLC25A30Q5SVS4 291 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 PLBD1Q6P4A8 553 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 HSD17B13Q7Z5P4 300 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 EIF4E3Q8N5X7 224 aaKnown RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 SYT14Q8NB59 555 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 CD180Q99467 661 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 THAP7Q9BT49 309 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 MS4A7Q9GZW8 240 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 TMEM27Q9HBJ8 222 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 HINT3Q9NQE9 182 aaKnown RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 SPAG17Q6Q759 2223 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 TRAV6A0A075B6T7 132 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 TRAV27A0A087WT01 109 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 TMEM129A0AVI4 362 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 KDM4EB2RXH2 506 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 CLDN4O14493 209 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 HYAL3O43820 417 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 CTNSO60931 367 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 APOC1P02654 83 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 MAP3K8P41279 467 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 FASLGP48023 281 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 CRYZQ08257 329 aaKnown RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 FZD5Q13467 585 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 FAM53BQ14153 422 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 GRM7Q14831 915 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 OPCMLQ14982 345 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 ZNF791Q3KP31 576 aaPredicted RBP10.61□□□□□ -0.71
USP35-207ENST00000530546 MRGPREQ86SM8 312 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 TBX5Q99593 518 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 OR10H1Q9Y4A9 318 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 IRGMA1A4Y4 181 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 RHPN2P1A8MT19 583 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 MPTX1A8MV57 137 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 AIPO00170 330 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 NUPL2O15504 423 aaKnown RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 AK1P00568 194 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 BMP7P18075 431 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FNTBP49356 437 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 SLC16A1P53985 500 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 CAV3P56539 151 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 PRAMEF17Q5VTA0 474 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 AADACL4Q5VUY2 407 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FAM198BQ6UWH4 519 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 NPSR1Q6W5P4 371 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FTMTQ8N4E7 242 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 RCBTB1Q8NDN9 531 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 BVESQ8NE79 360 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 OR52L1Q8NGH7 329 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 OR51G2Q8NGK0 314 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 ADAMTS14Q8WXS8 1223 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 BPIFA2Q96DR5 249 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 SENP5Q96HI0 755 aaPredicted RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 ART5Q96L15 291 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 HS6ST2Q96MM7 605 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 IFT27Q9BW83 186 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FLRT3Q9NZU0 649 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 ZNF223Q9UK11 482 aaPredicted RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 PLCL2Q9UPR0 1127 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 A0A1B0GWA3 101 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 YKT6O15498 198 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 SULT1B1O43704 296 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 LYPD3O95274 346 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 TCRBP04435 133 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 LIMS3P0CW19 117 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 LIMS4P0CW20 117 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 AHCYP23526 432 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 OR1D4P47884 311 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FXYD6P3P58550 94 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FABP5Q01469 135 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 DHODHQ02127 395 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 CXXC5Q7LFL8 322 aaKnown RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 CDK20Q8IZL9 346 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 GATSQ8NAP1 163 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 OR51Q1Q8NH59 317 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 C1QTNF6Q9BXI9 259 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 PDE7BQ9NP56 450 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 FGF20Q9NP95 211 aaPredicted RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 LRIT1Q9P2V4 623 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 EXTL2Q9UBQ6 330 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 PPIEQ9UNP9 301 aaKnown RBP10.6□□□□□ -0.71
USP35-207ENST00000530546 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 MED31Q9Y3C7 131 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 SPEGQ15772 3267 aa10.6□□□□□ -0.71
USP35-207ENST00000530546 DNASE2O00115 360 aaPredicted RBP10.59□□□□□ -0.71
USP35-207ENST00000530546 NMBP08949 121 aa10.59□□□□□ -0.71
USP35-207ENST00000530546 BCKDHBP21953 392 aa10.59□□□□□ -0.71
USP35-207ENST00000530546 RBMS1P29558 406 aaKnown RBP10.59□□□□□ -0.71
USP35-207ENST00000530546 OR1D5P58170 312 aa10.59□□□□□ -0.71
USP35-207ENST00000530546 SKP1P63208 163 aa10.59□□□□□ -0.71
USP35-207ENST00000530546 TSC22D1Q15714 1073 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms