RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SQSTM1Q13501 440 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 Q499Y3 187 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 LILRB2Q8N423 598 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 NUDT8Q8WV74 236 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 ARL5BQ96KC2 179 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 PRMT8Q9NR22 394 aaPredicted RBP14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 RHBDD3Q9Y3P4 386 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 SLC22A23A1A5C7 686 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PIP5K1CO60331 668 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ZNF28P17035 718 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PFN3P60673 137 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SPOCK1Q08629 439 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 GPR176Q14439 515 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 LTB4RQ15722 352 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SULF2Q8IWU5 870 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 MRPL41Q8IXM3 137 aaKnown RBP14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TSPAN10Q9H1Z9 355 aaPredicted RBP14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC6A20Q9NP91 592 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 DPM1O60762 260 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 IFNA10P01566 189 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SBK3P0C264 359 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 MMP11P24347 488 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SYT14P1Q58G82 188 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM71E1Q6IPT2 247 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PXT1Q8NFP0 134 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 YKT6O15498 198 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TRIM23P36406 574 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 CSNK1A1P48729 337 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ETV1P50549 477 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 RLIMQ9NVW2 624 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 NDUFB11Q9NX14 153 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 REV1Q9UBZ9 1251 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TARM1B6A8C7 271 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SULT1B1O43704 296 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 MED6O75586 246 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 IGHG1P01857 330 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CRMP1Q14194 572 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 HYAL4Q2M3T9 481 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TIGD3Q6B0B8 471 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 WDR88Q6ZMY6 472 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 AP1S3Q96PC3 154 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CCNL2Q96S94 520 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ETV7Q9Y603 341 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TMEM269A0A1B0GVZ9 245 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 hCG_1807616A0A1W2PRN6 198 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 A6NLC8 198 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TPMTP51580 245 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RPP30P78346 268 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FOXK2Q01167 660 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 GAB1Q13480 694 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZMAT1Q5H9K5 638 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TECPR1Q7Z6L1 1165 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 VRK3Q8IV63 474 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ADGRF3Q8IZF5 1079 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC2A12Q8TD20 617 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NICN1Q9BSH3 213 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 LTB4R2Q9NPC1 389 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NUMA1Q14980 2115 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SULT2B1O00204 365 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZFAND5O76080 213 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CLDN6P56747 220 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM160A2Q8N612 972 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZNF740Q8NDX6 193 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 DNAAF1Q8NEP3 725 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SCARB1Q8WTV0 552 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NPRL2Q8WTW4 380 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RADILQ96JH8 1075 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 GHRLQ9UBU3 117 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ADAM18Q9Y3Q7 739 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CXorf51AA0A1B0GTR3 108 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SSX4O60224 188 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SNU13P55769 128 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 BDH1Q02338 343 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OPN5Q6U736 354 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TMEM106AQ96A25 262 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TNFRSF13CQ96RJ3 184 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC35D3Q5M8T2 416 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ANKRD34AQ69YU3 496 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 LMNTD1Q8N9Z9 388 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ABHD5Q8WTS1 349 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 TM4SF18Q96CE8 201 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 OR14A2Q96R54 314 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 LYSMD1Q96S90 227 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 NEURL2Q9BR09 285 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ALG12Q9BV10 488 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 SMIM3Q9BZL3 60 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 MMACHCQ9Y4U1 282 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms