RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SQSTM1Q13501 440 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 Q499Y3 187 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 LILRB2Q8N423 598 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 NUDT8Q8WV74 236 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 ARL5BQ96KC2 179 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 PRMT8Q9NR22 394 aaPredicted RBP14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 RHBDD3Q9Y3P4 386 aa14.33□□□□□ -0.11
PCDHA4-203ENST00000530339 SLC22A23A1A5C7 686 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PIP5K1CO60331 668 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ZNF28P17035 718 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PFN3P60673 137 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SPOCK1Q08629 439 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 GPR176Q14439 515 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 LTB4RQ15722 352 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SULF2Q8IWU5 870 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 MRPL41Q8IXM3 137 aaKnown RBP14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TSPAN10Q9H1Z9 355 aaPredicted RBP14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC6A20Q9NP91 592 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 DPM1O60762 260 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 IFNA10P01566 189 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SBK3P0C264 359 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 MMP11P24347 488 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 SYT14P1Q58G82 188 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM71E1Q6IPT2 247 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 PXT1Q8NFP0 134 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 YKT6O15498 198 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TRIM23P36406 574 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 CSNK1A1P48729 337 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 ETV1P50549 477 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 RLIMQ9NVW2 624 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 NDUFB11Q9NX14 153 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 REV1Q9UBZ9 1251 aa14.33□□□□□ -0.12
PCDHA4-203ENST00000530339 TARM1B6A8C7 271 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SULT1B1O43704 296 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 MED6O75586 246 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 IGHG1P01857 330 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CRMP1Q14194 572 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 HYAL4Q2M3T9 481 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TIGD3Q6B0B8 471 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 WDR88Q6ZMY6 472 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 AP1S3Q96PC3 154 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CCNL2Q96S94 520 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ETV7Q9Y603 341 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TMEM269A0A1B0GVZ9 245 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 hCG_1807616A0A1W2PRN6 198 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 A6NLC8 198 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TPMTP51580 245 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RPP30P78346 268 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FOXK2Q01167 660 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 GAB1Q13480 694 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZMAT1Q5H9K5 638 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TECPR1Q7Z6L1 1165 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 VRK3Q8IV63 474 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ADGRF3Q8IZF5 1079 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC2A12Q8TD20 617 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NICN1Q9BSH3 213 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 LTB4R2Q9NPC1 389 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NUMA1Q14980 2115 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SULT2B1O00204 365 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZFAND5O76080 213 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CLDN6P56747 220 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 FAM160A2Q8N612 972 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ZNF740Q8NDX6 193 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 DNAAF1Q8NEP3 725 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SCARB1Q8WTV0 552 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 NPRL2Q8WTW4 380 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 RADILQ96JH8 1075 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 GHRLQ9UBU3 117 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 ADAM18Q9Y3Q7 739 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 CXorf51AA0A1B0GTR3 108 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SSX4O60224 188 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SNU13P55769 128 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 BDH1Q02338 343 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 OPN5Q6U736 354 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TMEM106AQ96A25 262 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 TNFRSF13CQ96RJ3 184 aa14.32□□□□□ -0.12
PCDHA4-203ENST00000530339 SLC35D3Q5M8T2 416 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ANKRD34AQ69YU3 496 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 LMNTD1Q8N9Z9 388 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ABHD5Q8WTS1 349 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 TM4SF18Q96CE8 201 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 OR14A2Q96R54 314 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 LYSMD1Q96S90 227 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 NEURL2Q9BR09 285 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 ALG12Q9BV10 488 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 SMIM3Q9BZL3 60 aa14.31□□□□□ -0.12
PCDHA4-203ENST00000530339 MMACHCQ9Y4U1 282 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms