RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 OCIAD1Q9NX40 245 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
ECHDC1-220ENST00000528402 LOC102723996A0A087X1L8 192 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TMED7-TICAM2A0A0A6YYA0 188 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TRBV11-1A0A0K0K1C0 115 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 A0A1W2PQL4 384 aaPredicted RBP13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TMEM221A6NGB7 291 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 B4E171 279 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 LRRN3E7EW58 273 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 M0R296 226 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 CASKO14936 926 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 NPIPB7O75200 414 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 SPI1P17947 270 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TNFSF8P32971 234 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 CD79BP40259 229 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TSPAN7P41732 249 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 MTNR1BP49286 362 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 BLVRAP53004 296 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 DEFA1P59665 94 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 DEFA3P59666 94 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 LTBQ06643 244 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 SGCBQ16585 318 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 CDONQ4KMG0 1287 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 FAM69AQ5T7M9 428 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 PLEKHG7Q6ZR37 379 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 MARCH9Q86YJ5 346 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 SLC35F2Q8IXU6 374 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 BMPERQ8N8U9 685 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 ZBTB44Q8NCP5 570 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 MOSPD2Q8NHP6 518 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 DUSP19Q8WTR2 217 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 ACOT12Q8WYK0 555 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 PHYHIPQ92561 330 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TAAR8Q969N4 342 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 MOGAT1Q96PD6 335 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 RTN4RQ9BZR6 473 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 RXFP3Q9NSD7 469 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 TMED7Q9Y3B3 224 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 PCDHGA5Q9Y5G8 931 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 MPDZO75970 2070 aa13.42□□□□□ -0.26
ECHDC1-220ENST00000528402 IGHV3-20A0A0C4DH32 117 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 C9J4A7 227 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 J3QLW9 94 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 CTDSP2O14595 271 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 OGG1O15527 345 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 RGS5O15539 181 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 SCO2O43819 266 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 IGHEP01854 428 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 CLUP10909 449 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ZNF19P17023 458 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.265e-10■■■■□ 20.2
ECHDC1-220ENST00000528402 RPL18Q07020 188 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ATP1A4Q13733 1029 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 EXT1Q16394 746 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 DDI2Q5TDH0 399 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 RPL22L1Q6P5R6 122 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 LEG1Q6P5S2 330 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 METAP1DQ6UB28 335 aaPredicted RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 B3GLCTQ6Y288 498 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 BTLAQ7Z6A9 289 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ADGRG3Q86Y34 549 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 OR2T4Q8NH00 348 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 OR5J2Q8NH18 312 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 NEIL3Q8TAT5 605 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 KIAA1143Q96AT1 154 aaPredicted RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 C4orf36Q96KX1 117 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 PHOX2BQ99453 314 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 TBX5Q99593 518 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 TMED9Q9BVK6 235 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 GTPBP2Q9BX10 602 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 TPK1Q9H3S4 243 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 KLHL1Q9NR64 748 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 MYOTQ9UBF9 498 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 PLEKHB1Q9UF11 243 aaPredicted RBP13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ADAM30Q9UKF2 790 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 EXPH5Q8NEV8 1989 aa13.41□□□□□ -0.26
ECHDC1-220ENST00000528402 IGLV3-32A0A0A0MS00 114 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 HSPB2A8KAH6 182 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ETV2O00321 342 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 PHYHO14832 338 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 KHNYNO15037 678 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 ZNF208O43345 1280 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 SUSD5O60279 629 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 AHSA1O95433 338 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 MRPL3P09001 348 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 TACSTD2P09758 323 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 TGM1P22735 817 aa13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
ECHDC1-220ENST00000528402 CDKN2AP42771 156 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms