RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	IGFBPL1	Q8WX77	278 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC38A4	Q969I6	547 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC25A36	Q96CQ1	311 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	CCL19	Q99731	98 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	PIP5K1A	Q99755	562 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	TMUB1	Q9BVT8	246 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	AMBRA1	Q9C0C7	1298 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	PIF1	Q9H611	641 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	TMEM27	Q9HBJ8	222 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	NGB	Q9NPG2	151 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	B3GAT1	Q9P2W7	334 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	RASD1	Q9Y272	281 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	RNF115	Q9Y4L5	304 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	CAPN7	Q9Y6W3	813 aa		10.35	□□□□□ -0.75
PSMC3-205	ENST00000528362	TRAV36DV7	A0A075B6V5	113 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	LOC100653049	A0A140TA62	436 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CIB4	A0PJX0	185 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CCT8L1P	A6NM43	557 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362		M0R082	166 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC22A2	O15244	555 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CLOCK	O15516	846 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	FMO6P	O60774	539 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	KRT34	O76011	436 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	VAMP5	O95183	116 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	NPPA	P01160	153 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	C8B	P07358	591 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	PTN	P21246	168 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CDH12	P55289	794 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	BSPH1	Q075Z2	132 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	LGALS3BP	Q08380	585 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	FOXD4	Q12950	439 aa	Predicted RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	MMEL1	Q495T6	779 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	FAM69A	Q5T7M9	428 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	C9orf135	Q5VTT2	229 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	C5orf46	Q6UWT4	87 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CREB3L2	Q70SY1	520 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	CCDC80	Q76M96	950 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	PATL1	Q86TB9	770 aa	Known RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	RBM45	Q8IUH3	476 aa	Known RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	EPHX4	Q8IUS5	362 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZNF611	Q8N823	705 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	KBTBD8	Q8NFY9	601 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	OR6T1	Q8NGN1	323 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	OR52N5	Q8NH56	324 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZNF417	Q8TAU3	575 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	PIGT	Q969N2	578 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	MUCL1	Q96DR8	90 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC47A1	Q96FL8	570 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	MUS81	Q96NY9	551 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	MCHR1	Q99705	422 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	SH3GL1	Q99961	368 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLCO5A1	Q9H2Y9	848 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	ESRP2	Q9H6T0	727 aa	Known RBP	10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	EVA1A	Q9H8M9	152 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	UPB1	Q9UBR1	384 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	USP22	Q9UPT9	525 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC25A15	Q9Y619	301 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362	ROS1	P08922	2347 aa		10.34	□□□□□ -0.75
PSMC3-205	ENST00000528362		A0A1W2PR80	420 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	ATP8B1	O43520	1251 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR2T1	O43869	369 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	SMPD2	O60906	423 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	LYPD3	O95274	346 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	THY1	P04216	161 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	CD3E	P07766	207 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	CD99	P14209	185 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	CBL	P22681	906 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	GTF2E2	P29084	291 aa	Known RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	MPG	P29372	298 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	GRPR	P30550	384 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	SELENOP	P49908	381 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	NKX6-1	P78426	367 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	LTB	Q06643	244 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	GABRA6	Q16445	453 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	SWT1	Q5T5J6	900 aa	Known RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	INTS11	Q5TA45	600 aa	Known RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR7E24	Q6IFN5	339 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	ADAM5	Q6NVV9	412 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF613	Q6PF04	617 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	WDR88	Q6ZMY6	472 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	SSX8	Q7RTT4	187 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	KDM8	Q8N371	416 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	POU5F2	Q8N7G0	328 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	WDR31	Q8NA23	367 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	POMGNT2	Q8NAT1	580 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR6S1	Q8NH40	331 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	RNF217	Q8TC41	542 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	NEUROG1	Q92886	237 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	RCN3	Q96D15	328 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF583	Q96ND8	569 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	ECSIT	Q9BQ95	431 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	DLL4	Q9NR61	685 aa		10.33	□□□□□ -0.76
PSMC3-205	ENST00000528362	SELENON	Q9NZV5	590 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms