RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MIOXQ9UGB7 285 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 EMCNQ9ULC0 261 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 RNF6Q9Y252 685 aa4.76□□□□□ -1.65
PCF11-202ENST00000528336 RBMX2Q9Y388 322 aaKnown RBP4.76□□□□□ -1.65
PCF11-202ENST00000528336 MROH7-TTC4A0A0A0MT08 1334 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 TIAM2Q8IVF5 1701 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 IGHV3OR16-10A0A075B7F0 116 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 ZNF840PA6NDX5 716 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 ERI2A8K979 691 aaKnown RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 A8MU76 341 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 MLNRO43193 412 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 PI15O43692 258 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 LRCH4O75427 683 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 FRAT2O75474 233 aaPredicted RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 RBBP9O75884 186 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 SERPINE2P07093 398 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 ETS2P15036 469 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CYP11B1P15538 503 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 NQO2P16083 231 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 NCK1P16333 377 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 C4BPBP20851 252 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 PSMB6P28072 239 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR3A3P47888 321 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 IST1P53990 364 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CLDN18P56856 261 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 STX17P56962 302 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 PSMC5P62195 406 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 TNNC1P63316 161 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CDK16Q00536 496 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 DGCR6Q14129 220 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CRMP1Q14194 572 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CCDC14Q49A88 953 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 SFT2D3Q587I9 215 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 XKR4Q5GH76 650 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 TMIGD1Q6UXZ0 262 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 KCNMB4Q86W47 210 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 MFSD6LQ8IWD5 586 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 SLC22A15Q8IZD6 547 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 C17orf78Q8N4C9 275 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CCDC185Q8N715 623 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 NFAM1Q8NET5 270 aaPredicted RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR5T3Q8NGG3 340 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR51G2Q8NGK0 314 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR6M1Q8NGM8 313 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR4D5Q8NGN0 318 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR10G7Q8NGN6 311 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR4L1Q8NH43 312 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 PHOSPHO2Q8TCD6 241 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 FAM222BQ8WU58 562 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CHMP6Q96FZ7 201 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 DEFB118Q96PH6 123 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 C9orf16Q9BUW7 83 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 FUNDC2Q9BWH2 189 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 RAB11FIP5Q9BXF6 653 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 TM6SF2Q9BZW4 377 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 OR2AG1Q9H205 316 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 DHX33Q9H6R0 707 aaKnown RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 RCOR3Q9P2K3 495 aaPredicted RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 THAP10Q9P2Z0 257 aaPredicted RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 KLK13Q9UKR3 277 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 ABCG2Q9UNQ0 655 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 PUS1Q9Y606 427 aaKnown RBP eCLIP4.75□□□□□ -1.65
PCF11-202ENST00000528336 DICER1Q9UPY3 1922 aaKnown RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 COL1A1P02452 1464 aaPredicted RBP4.75□□□□□ -1.65
PCF11-202ENST00000528336 ARAP2Q8WZ64 1704 aa4.75□□□□□ -1.65
PCF11-202ENST00000528336 CHD4Q14839 1912 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 TMEM210A6NLX4 147 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SERPINE3A8MV23 424 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 A8MXK9 166 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 H3BTX0 84 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 ITGB1BP1O14713 200 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 MYOGP15173 224 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 TCN1P20061 433 aaPredicted RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 GIFP27352 417 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SHC1P29353 583 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 MAT2AP31153 395 aaKnown RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 HOXA9P31269 272 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PLP1P60201 277 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 KDSRQ06136 332 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PAX8Q06710 450 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 FADDQ13158 208 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PIGHQ14442 188 aaPredicted RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 VAMP3Q15836 100 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SPANXN4Q5MJ08 99 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 LYPLAL1Q5VWZ2 237 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 ZNF470Q6ECI4 717 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 FAM71F2Q6NXP2 309 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 ASCL4Q6XD76 172 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 C3P1Q6ZMU1 363 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 DPY19L4Q7Z388 723 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SELENOHQ8IZQ5 122 aaKnown RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 TEX26Q8N6G2 289 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 RNF149Q8NC42 400 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 NANPQ8TBE9 248 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 TMEM37Q8WXS4 190 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PELI1Q96FA3 418 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 ZNF274Q96GC6 653 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms