RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 STAMBPO95630 424 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 IGLV1-44P01699 117 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 ALDOCP09972 364 aaKnown RBP20.46■□□□□ 0.87
CPSF1-202ENST00000527827 PAX7P23759 505 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 IL12AP29459 219 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 ANXA11P50995 505 aaKnown RBP20.46■□□□□ 0.87
CPSF1-202ENST00000527827 NME5P56597 212 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 UBE2NP61088 152 aaKnown RBP20.46■□□□□ 0.87
CPSF1-202ENST00000527827 SQLEQ14534 574 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 ZSWIM7Q19AV6 140 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 ZNF836Q6ZNA1 936 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 VRK2Q86Y07 508 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 EPHX4Q8IUS5 362 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 TRIML2Q8N7C3 387 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 ZNF540Q8NDQ6 660 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 PNPT1Q8TCS8 783 aaKnown RBP20.46■□□□□ 0.87
CPSF1-202ENST00000527827 MAGEE2Q8TD90 523 aaPredicted RBP20.46■□□□□ 0.87
CPSF1-202ENST00000527827 TAPBPLQ9BX59 468 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 HAO1Q9UJM8 370 aa20.46■□□□□ 0.87
CPSF1-202ENST00000527827 A0A096LPE4 126 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 A0A1W2PPZ6 126 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 A8MVM7 634 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 VAMP5O95183 116 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 GSNP06396 782 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 GIFP27352 417 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 IDH3GP51553 393 aaPredicted RBP20.45■□□□□ 0.86
CPSF1-202ENST00000527827 HGFACQ04756 655 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 WBP2NLQ6ICG8 309 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 OGFOD2Q6N063 350 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 NIPAL3Q6P499 406 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF621Q6ZSS3 439 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 PEX5LQ8IYB4 626 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 CADM2Q8N3J6 435 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF317Q96PQ6 595 aaPredicted RBP20.45■□□□□ 0.86
CPSF1-202ENST00000527827 PRDM4Q9UKN5 801 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 DSPPQ9NZW4 1301 aa20.45■□□□□ 0.86
CPSF1-202ENST00000527827 BIRC5O15392 142 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 NPIPB7O75200 414 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 PGRP06401 933 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 SLC1A6P48664 564 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 C1orf140Q5VVS0 124 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 MYPOPQ86VE0 399 aaPredicted RBP20.44■□□□□ 0.86
CPSF1-202ENST00000527827 NUP37Q8NFH4 326 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 OR4F15Q8NGB8 312 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 OR52P1PQ8NH57 321 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 OR52E6Q96RD3 313 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 LINC00470Q9BZP3 86 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 RAB1BQ9H0U4 201 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 MEAF6Q9HAF1 191 aa20.44■□□□□ 0.86
CPSF1-202ENST00000527827 OR6C65A6NJZ3 312 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 IGKV3-15P01624 115 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 CELA3BP08861 270 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 PRG2P13727 222 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 IL2RGP31785 369 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 MVDP53602 400 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 VSNL1P62760 191 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 LIN52Q52LA3 116 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 PRAMEF8Q5VWM4 474 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 PRAMEF7Q5VXH5 474 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 LIPNQ5VXI9 398 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 FAM169BQ8N8A8 192 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 DOK1Q99704 481 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 AIG1Q9NVV5 245 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 RASD1Q9Y272 281 aa20.43■□□□□ 0.86
CPSF1-202ENST00000527827 TMEM229AB2RXF0 380 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 LILRA1O75019 489 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 SNUPNO95149 360 aaKnown RBP20.42■□□□□ 0.86
CPSF1-202ENST00000527827 TACSTD2P09758 323 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 TFPTP0C1Z6 253 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 HOXB1P14653 301 aaPredicted RBP20.42■□□□□ 0.86
CPSF1-202ENST00000527827 DAOP14920 347 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 THBS4P35443 961 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 COPZ1P61923 177 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 ROR2Q01974 943 aaKnown RBP20.42■□□□□ 0.86
CPSF1-202ENST00000527827 ZCCHC24Q8N2G6 241 aaKnown RBP20.42■□□□□ 0.86
CPSF1-202ENST00000527827 CLIP4Q8N3C7 705 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 C1orf159Q96HA4 380 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF442Q9H7R0 627 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 SLC6A13Q9NSD5 602 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 PNPOQ9NVS9 261 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 CHST2Q9Y4C5 530 aa20.42■□□□□ 0.86
CPSF1-202ENST00000527827 TMEM129A0AVI4 362 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 FTCDNL1E5RQL4 147 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 hCG_2039718K7EN88 272 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 IGFBP1P08833 259 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 SH3BGRP55822 239 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 LRRC74AQ0VAA2 488 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 KDM8Q8N371 416 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 SVOPLQ8N434 492 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 RFLNBQ8N5W9 214 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 NEU4Q8WWR8 484 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 TMEM109Q9BVC6 243 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 MOV10Q9HCE1 1003 aaKnown RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 P2RX2Q9UBL9 471 aa20.41■□□□□ 0.86
CPSF1-202ENST00000527827 FBXO9Q9UK97 447 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF443Q9Y2A4 671 aaPredicted RBP20.41■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF503-AS2A6NEH8 195 aa20.4■□□□□ 0.86
CPSF1-202ENST00000527827 RPL36A-HNRNPH2H7BZ11 118 aa20.4■□□□□ 0.86
CPSF1-202ENST00000527827 SDHDO14521 159 aa20.4■□□□□ 0.86
CPSF1-202ENST00000527827 ZNF432O94892 652 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms