RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GPR85P60893 370 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 RBPJQ06330 500 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 CLPPQ16740 277 aaPredicted RBP13.83□□□□□ -0.2
USP47-207ENST00000527733 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 HBMQ6B0K9 141 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 OR7E24Q6IFN5 339 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 MNTQ99583 582 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 ELOVL3Q9HB03 270 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 TFAP2AP05549 437 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.2
USP47-207ENST00000527733 RAB11BQ15907 218 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 ZNF628Q5EBL2 1059 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 NIPAL3Q6P499 406 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 FAM199XQ6PEV8 388 aaPredicted RBP13.83□□□□□ -0.2
USP47-207ENST00000527733 XKRXQ6PP77 449 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 SLC19A3Q9BZV2 496 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 ZNF221Q9UK13 617 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 PLEKHA6Q9Y2H5 1048 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 PCDHGA6Q9Y5G7 932 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 TMEM269A0A1B0GVZ9 245 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 D6RAR5 112 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 RAD1O60671 282 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 CD1EP15812 388 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 APLNRP35414 380 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 GLYR1Q49A26 553 aaPredicted RBP13.83□□□□□ -0.2
USP47-207ENST00000527733 SCGB2B2Q4G0G5 96 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 MRM1Q6IN84 353 aaKnown RBP13.83□□□□□ -0.2
USP47-207ENST00000527733 TMEM53Q6P2H8 277 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 SLC22A16Q86VW1 577 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 D2HGDHQ8N465 521 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 RADILQ96JH8 1075 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 VNN3Q9NY84 501 aa13.83□□□□□ -0.2
USP47-207ENST00000527733 TMEM72A0PK05 275 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 METTL15A6NJ78 407 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 RBBP9O75884 186 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 RIN1Q13671 783 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ADPRMQ3LIE5 342 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 BAIAP2L2Q6UXY1 529 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ZNF620Q6ZNG0 422 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 LANCL3Q6ZV70 420 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ARMC10Q8N2F6 343 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 OR4N2Q8NGD1 307 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 RFT1Q96AA3 541 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 NECAB3Q96P71 396 aaPredicted RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 KLF13Q9Y2Y9 288 aaPredicted RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 GRIP1Q9Y3R0 1128 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 PCDHGA5Q9Y5G8 931 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 A6NLC8 198 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 SOCS6O14544 535 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 GPRIN2O60269 458 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 PLATP00750 562 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ARPC4P59998 168 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 TRIP6Q15654 476 aaKnown RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 ZFP69Q49AA0 526 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ABCA11PQ4W5N1 156 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 PWWP2BQ6NUJ5 590 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 NDUFAF7Q7L592 441 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 TRIM63Q969Q1 353 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ART1P52961 327 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ISL1P61371 349 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 MELKQ14680 651 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 PRICKLE4Q2TBC4 344 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 BORAQ6PGQ7 559 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 UTS2BQ765I0 119 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 UBE3DQ7Z6J8 389 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 CAPSLQ8WWF8 208 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 DIMT1Q9UNQ2 313 aaKnown RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 NOSIPQ9Y314 301 aaKnown RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 CACNA1CQ13936 2221 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 M0R082 166 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 WRBO00258 174 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 AGAP7PQ5VUJ5 663 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 RPL22L1Q6P5R6 122 aaKnown RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 PRSS42Q7Z5A4 293 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 SPACA9Q96E40 222 aaPredicted RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 ARSGQ96EG1 525 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 AGAP4Q96P64 663 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 NEDD4LQ96PU5 975 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 ZNF587Q96SQ5 575 aaPredicted RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 OR10A2Q9H208 303 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 C1orf198Q9H425 327 aa13.82□□□□□ -0.2
USP47-207ENST00000527733 NDRG4Q9ULP0 352 aaKnown RBP13.82□□□□□ -0.2
USP47-207ENST00000527733 FCER2P06734 321 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 AVPR2P30518 371 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 OCLNQ16625 522 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 C4orf46Q504U0 113 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 DPY19L4Q7Z388 723 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 SFTPA2Q8IWL1 248 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 MEPEQ9NQ76 525 aaPredicted RBP13.81□□□□□ -0.2
USP47-207ENST00000527733 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 FAM166BA8MTA8 275 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 VAMP5O95183 116 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 OR8G3PP0DMU2 310 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 GABREP78334 506 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
USP47-207ENST00000527733 NKAPLQ5M9Q1 402 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms