RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ANXA7P20073 488 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 RPL4P36578 427 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SNRPNP63162 240 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 RPE65Q16518 533 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 TMEFF1Q8IYR6 380 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 OR2L13Q8N349 312 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 OR6K6Q8NGW6 343 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SLC2A12Q8TD20 617 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 LCN9Q8WX39 176 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 RAB7BQ96AH8 199 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 C10orf90Q96M02 699 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 CNN2Q99439 309 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 POT1Q9NUX5 634 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SDHAF2Q9NX18 166 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 KCNE5Q9UJ90 142 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 TEX46H3BTG2 121 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 PROS1P07225 676 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SLC2A5P22732 501 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 GABRA3P34903 492 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 TSFMP43897 325 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 ACTA2P62736 377 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 ACTG2P63267 376 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 GAS6Q14393 721 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 PON3Q15166 354 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 IRF4Q15306 451 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 CEBPEQ15744 281 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 ZC3H14Q6PJT7 736 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 TSSK4Q6SA08 328 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 SAMD14Q8IZD0 417 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 CCL4L1Q8NHW4 92 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 S100A16Q96FQ6 103 aaKnown RBP11.49□□□□□ -0.57
CAPN1-208ENST00000527323 EMC3Q9P0I2 261 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 FBXL21Q9UKT6 434 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 IER3IP1Q9Y5U9 82 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 NPTNQ9Y639 398 aa11.49□□□□□ -0.57
CAPN1-208ENST00000527323 G3V3Q6 166 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CTDSPLO15194 276 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 LDB3O75112 727 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 PTP4A3O75365 173 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 PDGFBP01127 241 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 OR2T7P0C7T2 308 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 HIST1H1CP16403 213 aaKnown RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CXCL2P19875 107 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 PEBP1P30086 187 aaKnown RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 GRPRP30550 384 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 NUP62P37198 522 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 KIAA1024LP59773 190 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 TNFRSF17Q02223 184 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 TMEM69Q5SWH9 247 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 ARHGAP11AQ6P4F7 1023 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 RPL22L1Q6P5R6 122 aaKnown RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 ALKAL2Q6UX46 152 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 OR6V1Q8N148 313 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 ZBTB44Q8NCP5 570 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 OR2T27Q8NH04 317 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 GAL3ST3Q96A11 431 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 MRGPRX1Q96LB2 322 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 HDAC8Q9BY41 377 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 ZNF350Q9GZX5 532 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 GPN1Q9HCN4 374 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CA10Q9NS85 328 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 NAP1L6A6NFF2 107 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CHURC1-FNTBB4DL54 471 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 GABARAPH6UMI1 98 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 PDCD5O14737 125 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CREBL2O60519 120 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 FMO6PO60774 539 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 SLC35G6P0C7Q6 338 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 NAT2P11245 290 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 RUNX2Q13950 521 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 EXOSC7Q15024 291 aaKnown RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 KCTD20Q7Z5Y7 419 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CNOT9Q92600 299 aaKnown RBP11.48□□□□□ -0.57
CAPN1-208ENST00000527323 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 HAO2Q9NYQ3 351 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 BAIAP2Q9UQB8 552 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 CACNA1HO95180 2353 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 SCN2AQ99250 2005 aa11.48□□□□□ -0.57
CAPN1-208ENST00000527323 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 IFITM5A6NNB3 132 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 IDSB3KWA1 339 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 ITGA10O75578 1167 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 LYPD3O95274 346 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 CPMP14384 443 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 POU3F2P20265 443 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 OC90Q02509 493 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 SGCGQ13326 291 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 SFRP5Q5T4F7 317 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 OR5M10Q6IEU7 315 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 VN1R4Q7Z5H5 301 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 IQCF2Q8IXL9 164 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 FAM71CQ8NEG0 241 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 SYNPRQ8TBG9 265 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 TSACCQ96A04 125 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 HSPA12BQ96MM6 686 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms