RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 BTNL2Q9UIR0 455 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 A0A096LPE4 126 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 A0A1W2PPZ6 126 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 A8MVM7 634 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ITM2AO43736 263 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ITGA2P17301 1181 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 NPR2P20594 1047 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 APEX1P27695 318 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 IL2RGP31785 369 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 THBS4P35443 961 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ANXA11P50995 505 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 CLNS1AP54105 237 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TUBA1BP68363 451 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TUBA4AP68366 448 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TXNL4AP83876 142 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 HGFACQ04756 655 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 DPY19L1Q2PZI1 675 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 UGT2A3Q6UWM9 527 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TUBA1AQ71U36 451 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 LINGO2Q7L985 606 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 EPHX4Q8IUS5 362 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ZCCHC24Q8N2G6 241 aaKnown RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ZNF786Q8N393 782 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 MREGQ8N565 214 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TRIML2Q8N7C3 387 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 PKNOX2Q96KN3 472 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ALKBH3Q96Q83 286 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-210ENST00000527027 LINC00470Q9BZP3 86 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 SEC61A2Q9H9S3 476 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 RLIMQ9NVW2 624 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 ADPRHL2Q9NX46 363 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 LGALS13Q9UHV8 139 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 PCDHB14Q9Y5E9 798 aa13.96□□□□□ -0.17
PTPRU-210ENST00000527027 TMEM129A0AVI4 362 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 CDHR4A6H8M9 788 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 CCDC154A6NI56 674 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 hCG_2039718K7EN88 272 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 UPK3AO75631 287 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 IGKV3-15P01624 115 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 TFPTP0C1Z6 253 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 MYZAPP0CAP1 466 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 NR2F1P10589 423 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 CBR1P16152 277 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 CREB1P16220 341 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 S100A3P33764 101 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 ACAA2P42765 397 aaKnown RBP13.95□□□□□ -0.18
PTPRU-210ENST00000527027 ETV4P43268 484 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-210ENST00000527027 COPZ1P61923 177 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 BNIP2Q12982 314 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 FAM174BQ3ZCQ3 159 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 NIPAL3Q6P499 406 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 CROCCP2Q86T23 111 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF781Q8N8C0 355 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 ANKK1Q8NFD2 765 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 UBASH3BQ8TF42 649 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 NELFAQ9H3P2 528 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 RASD1Q9Y272 281 aa13.95□□□□□ -0.18
PTPRU-210ENST00000527027 TMEM229AB2RXF0 380 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 E9PBE3 544 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 RPL36A-HNRNPH2H7BZ11 118 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 GKN3PP0CG01 181 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 PCMT1P22061 227 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 CDH15P55291 814 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 ROR2Q01974 943 aaKnown RBP13.94□□□□□ -0.18
PTPRU-210ENST00000527027 RIN1Q13671 783 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 C1orf140Q5VVS0 124 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 C12orf54Q6X4T0 127 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF621Q6ZSS3 439 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 PEX5LQ8IYB4 626 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 CADM2Q8N3J6 435 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 SVOPLQ8N434 492 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 PANX1Q96RD7 426 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 METRNQ9UJH8 293 aa13.94□□□□□ -0.18
PTPRU-210ENST00000527027 SH3PXD2BA1X283 911 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 FRS3O43559 492 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 TYROBPO43914 113 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 NPIPB7O75200 414 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 CELA3BP08861 270 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 IFNGR1P15260 489 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 LBPP18428 481 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 DVL1P1P54792 670 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 ABCE1P61221 599 aaKnown RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 ARF1P84077 181 aaKnown RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 ADRM1Q16186 407 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 COX20Q5RI15 118 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 MYPOPQ86VE0 399 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 VRK2Q86Y07 508 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 LRRC34Q8IZ02 419 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 IL17RDQ8NFM7 739 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 OR52P1PQ8NH57 321 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms