RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 SRMP19623 302 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SLC25A1P53007 311 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SNAP47Q5SQN1 464 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SLC6A19Q695T7 634 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SYT9Q86SS6 491 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SLC35F3Q8IY50 421 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 OR4D9Q8NGE8 314 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 OR51Q1Q8NH59 317 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 WSB2Q9NYS7 404 aaPredicted RBP19.4■□□□□ 0.7
VPS28-205ENST00000526204 MOKQ9UQ07 419 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 HIF3AQ9Y2N7 669 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 ZNF281Q9Y2X9 895 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 MYO9BQ13459 2157 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 OR2W5A6NFC9 320 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 CD3GP09693 182 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 RAG2P55895 527 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 TCTE1Q5JU00 501 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SLC22A10Q63ZE4 541 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 LEG1Q6P5S2 330 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 JAZF1Q86VZ6 243 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 SIAH3Q8IW03 269 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 DEDD2Q8WXF8 326 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 ALG12Q9BV10 488 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.4■□□□□ 0.7
VPS28-205ENST00000526204 GHITMQ9H3K2 345 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 EXOSC3Q9NQT5 275 aaKnown RBP19.4■□□□□ 0.7
VPS28-205ENST00000526204 RXFP3Q9NSD7 469 aa19.4■□□□□ 0.7
VPS28-205ENST00000526204 TEX13CA0A0J9YWL9 993 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 H0YIG0 161 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 OR2B3O76000 313 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ALX3O95076 343 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 STOMP27105 288 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 PSMB10P40306 273 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 DGCR2P98153 550 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 DYRK1AQ13627 763 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ZNF74Q16587 644 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 FNDC7Q5VTL7 733 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 CREB3L2Q70SY1 520 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 MED25Q71SY5 747 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ATG4DQ86TL0 474 aaPredicted RBP19.39■□□□□ 0.69
VPS28-205ENST00000526204 HSD17B8Q92506 261 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 NOX4Q9NPH5 578 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 NANSQ9NR45 359 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ZNF275Q9NSD4 429 aaPredicted RBP19.39■□□□□ 0.69
VPS28-205ENST00000526204 A0A0B4J203 849 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 BLOC1S5-TXNDC5H3BN57 136 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 IMPA2O14732 288 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 CLPSP04118 112 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 CD14P08571 375 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 TACSTD2P09758 323 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 UBL4AP11441 157 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 GABRA4P48169 554 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ELOCQ15369 112 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ANGPT1Q15389 498 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 GXYLT1Q4G148 440 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 LINC01590Q5TEZ4 76 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 MOSPD2Q8NHP6 518 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 ZPLD1Q8TCW7 415 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 OR2M2Q96R28 347 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 CACNG6Q9BXT2 260 aa19.39■□□□□ 0.69
VPS28-205ENST00000526204 PCDHGA9Q9Y5G4 932 aaKnown RBP19.39■□□□□ 0.69
VPS28-205ENST00000526204 TRAV6A0A075B6T7 132 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 LILRA5A6NI73 299 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 SCDO00767 359 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 LTBRP36941 435 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 AQP2P41181 271 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 CDKN2AP42771 156 aaKnown RBP19.38■□□□□ 0.69
VPS28-205ENST00000526204 BTBD16Q32M84 506 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 ZNF684Q5T5D7 378 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 SLC16A9Q7RTY1 509 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 C10orf53Q8N6V4 93 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 ZSCAN1Q8NBB4 408 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 SMRP1Q8NCR6 262 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 LGALS14Q8TCE9 139 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 SMIM4Q8WVI0 70 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 Q96M85 177 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 MRI1Q9BV20 369 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 CCDC86Q9H6F5 360 aaKnown RBP19.38■□□□□ 0.69
VPS28-205ENST00000526204 C2orf42Q9NWW7 574 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 AKAP7Q9P0M2 348 aaPredicted RBP19.38■□□□□ 0.69
VPS28-205ENST00000526204 ING4Q9UNL4 249 aa19.38■□□□□ 0.69
VPS28-205ENST00000526204 C17orf105B2RV13 164 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 AIPO00170 330 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 IL33O95760 270 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 GIFP27352 417 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 SKP2Q13309 424 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 CD276Q5ZPR3 534 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 CDH24Q86UP0 819 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 SLC38A3Q99624 504 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 SMAD5Q99717 465 aaKnown RBP19.37■□□□□ 0.69
VPS28-205ENST00000526204 NDEL1Q9GZM8 345 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 ACTR6Q9GZN1 396 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 EMC7Q9NPA0 242 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 SHISA7A6NL88 538 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 IFITM5A6NNB3 132 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 CHURC1-FNTBB4DL54 471 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 CD1CP29017 333 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 SDHAP31040 664 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 PPICP45877 212 aa19.37■□□□□ 0.69
VPS28-205ENST00000526204 FNTBP49356 437 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms