RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 HNRNPA1P09651 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
BDNF-213ENST00000525950 HIST1H1CP16403 213 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 ANXA7P20073 488 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 CSRP1P21291 193 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 DBPQ10586 325 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 STX4Q12846 297 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 HES5Q5TA89 166 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 GLB1L2Q8IW92 636 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 SMAP2Q8WU79 429 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 EDAQ92838 391 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 PAWRQ96IZ0 340 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 GPX7Q96SL4 187 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 PDCD1LG2Q9BQ51 273 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 MYOZ1Q9NP98 299 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 IFT46Q9NQC8 304 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 PHPT1Q9NRX4 125 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 C2orf42Q9NWW7 574 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 MRPL15Q9P015 296 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 GNG8Q9UK08 70 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 DAPP1Q9UN19 280 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 KLF2Q9Y5W3 355 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 A0A1B0GWA3 101 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ANXA2P2A6NMY6 339 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 HSPB2A8KAH6 182 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 F5H5P2 479 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 NKX2-2O95096 273 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 GYPBP06028 91 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 TACSTD2P09758 323 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 LINC00271P0C7V0 271 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 RAB3AP20336 220 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 CDK2P24941 298 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 SIM1P81133 766 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 DEFB103AP81534 67 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 TOMM20Q15388 145 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 HSPB2Q16082 182 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 GAB4Q2WGN9 574 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ZNF660Q6AZW8 331 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 MTFR2Q6P444 385 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 COX18Q8N8Q8 333 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 NPEPL1Q8NDH3 523 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 OR2AK2Q8NG84 335 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 RIT1Q92963 219 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 CCNL2Q96S94 520 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 C1orf198Q9H425 327 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 EXOSC3Q9NQT5 275 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 POT1Q9NUX5 634 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 FLRT3Q9NZU0 649 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 SLC17A4Q9Y2C5 497 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 PEX12O00623 359 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 RBBP9O75884 186 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 GLCEO94923 617 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 STATHP02808 62 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ZNF888P0CJ79 500 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ICAM2P13598 275 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ZNF10P21506 573 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 MPGP29372 298 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 DCTDP32321 178 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ACAA2P42765 397 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 ERVFC1P60507 584 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 SRSF4Q08170 494 aaKnown RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 Q499Y3 187 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 FCRLBQ6BAA4 426 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 STAC2Q6ZMT1 411 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 THRSPQ92748 146 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 ARMC5Q96C12 935 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 SCARF2Q96GP6 870 aaPredicted RBP7.33□□□□□ -1.24
BDNF-213ENST00000525950 SPHK1Q9NYA1 384 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 DEC1Q9P2X7 70 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 COPS3Q9UNS2 423 aa7.33□□□□□ -1.24
BDNF-213ENST00000525950 TTLL8A6PVC2 850 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 PYCARD-AS1I3L0S3 204 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 TNFSF14O43557 240 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 B3GALT2O43825 422 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 SDC3O75056 442 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 UBBP0CG47 229 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 UBCP0CG48 685 aaKnown RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 CSF2RBP32927 897 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 SLC25A1P53007 311 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 HCCSP53701 268 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 KIAA1024LP59773 190 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 RPS27AP62979 156 aaKnown RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 UBA52P62987 128 aaKnown RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 NDUFAF6Q330K2 333 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 TRMT12Q53H54 448 aaKnown RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 SFRP5Q5T4F7 317 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 KRT77Q7Z794 578 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 LRRTM1Q86UE6 522 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 COQ8AQ8NI60 647 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 CD99L2Q8TCZ2 262 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 RGP1Q92546 391 aaPredicted RBP7.32□□□□□ -1.24
BDNF-213ENST00000525950 CTHRC1Q96CG8 243 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 LRRC3BQ96PB8 259 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 MNTQ99583 582 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 ARL6Q9H0F7 186 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 IL21RQ9HBE5 538 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 SLC17A5Q9NRA2 495 aa7.32□□□□□ -1.24
BDNF-213ENST00000525950 YBX2Q9Y2T7 364 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms