RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 TMED1Q13445 227 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 SLC10A1Q14973 349 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 RAB35Q15286 201 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 SYT14P1Q58G82 188 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 DNAJC21Q5F1R6 531 aaKnown RBP2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 ABRAXAS1Q6UWZ7 409 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 GDPGP1Q6ZNW5 385 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 LANCL3Q6ZV70 420 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 KRT74Q7RTS7 529 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 SLC26A11Q86WA9 606 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 IQCF2Q8IXL9 164 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 OR8H2Q8N162 312 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 RPP25LQ8N5L8 163 aaKnown RBP2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 THAP8Q8NA92 274 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 XXYLT1Q8NBI6 393 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 CHPT1Q8WUD6 406 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 TADA1Q96BN2 335 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 AP2M1Q96CW1 435 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 OVOL2Q9BRP0 275 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 BPESC1Q9GZL8 116 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 ABCG8Q9H221 673 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 ANKZF1Q9H8Y5 726 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 NTN4Q9HB63 628 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 LPAR2Q9HBW0 351 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 XAB2Q9HCS7 855 aaKnown RBP2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 UTP6Q9NYH9 597 aaKnown RBP2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 CRNNQ9UBG3 495 aaPredicted RBP2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 LHX3Q9UBR4 397 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 SLC12A6Q9UHW9 1150 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 PSMD13Q9UNM6 376 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 WIPI2Q9Y4P8 454 aa2.85□□□□□ -1.95
NSMCE2-211ENST00000523549 CLPSL1A2RUU4 121 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 FRG2CA6NGY1 282 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 A8MXK9 166 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 NDC80O14777 642 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TBCAO75347 108 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 GLSO94925 669 aaPredicted RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 HEXBP07686 556 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 HLA-DPA1P20036 260 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CPT2P23786 658 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 MC5RP33032 325 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 HSD17B3P37058 310 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 HLCSP50747 726 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ALDH3A2P51648 485 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 XGP55808 180 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CYP24A1Q07973 514 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 BST2Q10589 180 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 BAMBIQ13145 260 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CUL3Q13618 768 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 PSMD6Q15008 389 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 SNRNP35Q16560 246 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TAZQ16635 292 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 UGT3A2Q3SY77 523 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TOR1AIP1Q5JTV8 583 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ERMARDQ5T6L9 678 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 C16orf87Q6PH81 154 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ZNF720Q7Z2F6 126 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 SLC22A16Q86VW1 577 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 SYCP3Q8IZU3 236 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 GCNT2Q8N0V5 402 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 KIF2BQ8N4N8 673 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TEX9Q8N6V9 391 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 OR2M7Q8NG81 312 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 OR4E2Q8NGC2 313 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 OR4K1Q8NGD4 311 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 OR4F5Q8NH21 305 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 METTL21AQ8WXB1 218 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TOMM40LQ969M1 308 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ACCSQ96QU6 501 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 FERMT1Q9BQL6 677 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 RIOK2Q9BVS4 552 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 SFXN3Q9BWM7 321 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TDRD1Q9BXT4 1180 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TXLNGYQ9BZA5 131 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 XPO4Q9C0E2 1151 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 HOXD1Q9GZZ0 328 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 OR2AG1Q9H205 316 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TUBB1Q9H4B7 451 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ST6GALNAC4Q9H4F1 302 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 RNF121Q9H920 327 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 B3GAT2Q9NPZ5 323 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CUTCQ9NTM9 273 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 IMP3Q9NV31 184 aaKnown RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 DCAF16Q9NXF7 216 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 STOX2Q9P2F5 926 aaPredicted RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ATXN10Q9UBB4 475 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 ZNF282Q9UDV7 671 aaPredicted RBP2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 GLS2Q9UI32 602 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TSPAN16Q9UKR8 245 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CELA1Q9UNI1 258 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 CHKBQ9Y259 395 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 TMED3Q9Y3Q3 217 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 RNF115Q9Y4L5 304 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 IKBKGQ9Y6K9 419 aa2.84□□□□□ -1.95
NSMCE2-211ENST00000523549 VPS13BQ7Z7G8 4022 aa2.84□□□□□ -1.96
NSMCE2-211ENST00000523549 HEATR1Q9H583 2144 aaKnown RBP2.84□□□□□ -1.96
NSMCE2-211ENST00000523549 KIAA2026Q5HYC2 2103 aa2.83□□□□□ -1.96
NSMCE2-211ENST00000523549 A0A1B0GUS0 222 aa2.83□□□□□ -1.96
NSMCE2-211ENST00000523549 FAM170AA1A519 330 aa2.83□□□□□ -1.96
NSMCE2-211ENST00000523549 ARHGEF33A8MVX0 844 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms