RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SEC14L2O76054 403 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 TOXO94900 526 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC2A10O95528 541 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MPIG6BO95866 241 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 CD79AP11912 226 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ATAD3CQ5T2N8 411 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SYT6Q5T7P8 510 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SCGB3A2Q96PL1 93 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR2A5Q96R48 311 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLAMF7Q9NQ25 335 aa12.04□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZC3H12DA2A288 527 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 PRAMEF25A6NGN4 478 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 GGT3PA6NGU5 568 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 UPK1BO75841 260 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 HLA-BQ31612 363 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 PYHIN1Q6K0P9 492 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 WDR34Q96EX3 536 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC25A44Q96H78 314 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 CCDC120Q96HB5 630 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 RHNO1Q9BSD3 238 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 ADAM18Q9Y3Q7 739 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 RGPD3A6NKT7 1758 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 ARID1AO14497 2285 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 A0A087WV62 115 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 A8MVM7 634 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 EML2O95834 649 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 IL1AP01583 271 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 RLN2P04090 185 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 CD3GP09693 182 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 HERV-K104P61576 105 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 MALLQ13021 153 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC22A10Q63ZE4 541 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF620Q6ZNG0 422 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR4N2Q8NGD1 307 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 GPBAR1Q8TDU6 330 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC41A2Q96JW4 573 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 BOKQ9UMX3 212 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 LYRM1O43325 122 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR7A10O76100 309 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SCG5P05408 212 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 H2AFB2P0C5Z0 115 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR2T7P0C7T2 308 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 BIDP55957 195 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 CLDN17P56750 224 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SPOCK1Q08629 439 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SOWAHCQ53LP3 525 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 C1orf140Q5VVS0 124 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 PAQR6Q6TCH4 344 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 BAIAP2L2Q6UXY1 529 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 DPY19L2P2Q6ZN68 376 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SIRT6Q8N6T7 355 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR2T27Q8NH04 317 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 CHRDQ9H2X0 955 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 C14orf166Q9Y224 244 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 KLK4Q9Y5K2 254 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 PIKFYVEQ9Y2I7 2098 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 IGHV5-51A0A0C4DH38 117 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 METTL15A6NJ78 407 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 GABARAPO95166 117 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 IFNA21P01568 189 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 SNRPGP62308 76 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 ADPRMQ3LIE5 342 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR5M1Q8NGP8 315 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 GOT1L1Q8NHS2 421 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 CDCP1Q9H5V8 836 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 TXNL4BQ9NX01 149 aaKnown RBP12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 GSKIPQ9P0R6 139 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 V9GY05 133 aa12.03□□□□□ -0.48
PCDHGB1-201ENST00000523390 MYO16Q9Y6X6 1858 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZAR1LA6NP61 321 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 DSCR3O14972 297 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 SCGB1D2O95969 90 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 SHC1P29353 583 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 GABRA5P31644 462 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 SIRPAP78324 504 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 PLK5Q496M5 336 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 FAM69AQ5T7M9 428 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 TMEM244Q5VVB8 128 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC35F3Q8IY50 421 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR8H3Q8N146 312 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 AKAP1Q92667 903 aaKnown RBP eCLIP12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 CLCC1Q96S66 551 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 GABARAPL1Q9H0R8 117 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR10A4Q9H209 315 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 ARRDC1-AS1Q9H2J1 176 aa12.02□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR51B6Q9H340 312 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms