RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 SERPINA11Q86U17 422 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 HIPK1Q86Z02 1210 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 ELOA3Q8NG57 546 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 OR9I1Q8NGQ6 314 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 MFSD8Q8NHS3 518 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 STK35Q8TDR2 534 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 HTRA1Q92743 480 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 GTF2H4Q92759 462 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 SLC35B4Q969S0 331 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 C3orf49Q96BT1 292 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 TLCD1Q96CP7 247 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 TNFRSF13CQ96RJ3 184 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 RAD21L1Q9H4I0 556 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 BCL2L10Q9HD36 194 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 OBP2BQ9NPH6 170 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 MOKQ9UQ07 419 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 PCDHB14Q9Y5E9 798 aa10.28□□□□□ -0.76
CTNNA1-237ENST00000523275 A0A096LNT2 108 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 ZNF587BE7ETH6 402 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 ATP6V1G2-DDX39BF2Z307 99 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 FRS3O43559 492 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 AHSA1O95433 338 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 LGI1O95970 557 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 NUDT7P0C024 238 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC25A16P16260 332 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 PAX7P23759 505 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 SELENOPP49908 381 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 HOXC5Q00444 222 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 LGALS3BPQ08380 585 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 LOXL1Q08397 574 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 TBRG1Q3YBR2 411 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 HMBOX1Q6NT76 420 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC2A7Q6PXP3 512 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 EPGNQ6UW88 154 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 CXXC5Q7LFL8 322 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 EPHX4Q8IUS5 362 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 ZNF525Q8N782 197 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 FAM168AQ92567 244 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 BCL2L2Q92843 193 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 MAL2Q969L2 176 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC25A36Q96CQ1 311 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 PAIP1Q9H074 479 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 TMBIM4Q9HC24 238 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.77
CTNNA1-237ENST00000523275 CR1P17927 2039 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 CHD3Q12873 2000 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 C5orf58C9J3I9 102 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 FTCDNL1E5RQL4 147 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 F12P00748 615 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 IFNA2P01563 188 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 PNMTP11086 282 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 BMP2P12643 396 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 FADDQ13158 208 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 MST1LQ2TV78 715 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 NIPAL3Q6P499 406 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 PODNL1Q6PEZ8 512 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 KDM8Q8N371 416 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 GOLGA6L1Q8N7Z2 621 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 OR1K1Q8NGR3 316 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 BBS10Q8TAM1 723 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 ZNF317Q96PQ6 595 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC38A2Q96QD8 506 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 KCNS3Q9BQ31 491 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 LINC00470Q9BZP3 86 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 RPS6KB2Q9UBS0 482 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 USH1CQ9Y6N9 552 aa10.26□□□□□ -0.77
CTNNA1-237ENST00000523275 RTTNQ86VV8 2226 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ARPC4-TTLL3A0A0A6YYG9 625 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 IGHV1-18A0A0C4DH31 117 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 OR2T1O43869 369 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ERLIN1O75477 346 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 UPK3AO75631 287 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 TGDSO95455 350 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 CRYAAP02489 173 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 CSF3P09919 207 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 HOXB1P14653 301 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ETS2P15036 469 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ZNF43P17038 809 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 PRKAR1BP31321 381 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 SERPINF1P36955 418 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 RPS5P46782 204 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 MRPL19P49406 292 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 CLDN17P56750 224 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 STX1BP61266 288 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 VLDLRP98155 873 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 EGR4Q05215 589 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 CHRFAM7AQ494W8 412 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ANKRD16Q6P6B7 361 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms