RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 DNAJA4Q8WW22 397 aaPredicted RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 GTPBP3Q969Y2 492 aaKnown RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 SLC25A36Q96CQ1 311 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 RSPO3Q9BXY4 272 aaPredicted RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 ZNF385DQ9H6B1 395 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 FAIMQ9NVQ4 179 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 CISD1Q9NZ45 108 aaKnown RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 TESQ9UGI8 421 aaKnown RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 SLC13A4Q9UKG4 626 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 NIPBLQ6KC79 2804 aaeCLIP14.26□□□□□ -0.13
CLN8-206ENST00000523237 USF3Q68DE3 2245 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 A0A0G2JND7 137 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 A0A1B0GWA3 101 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 OR6C65A6NJZ3 312 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 FTCDNL1E5RQL4 147 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 OR2T1O43869 369 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 TPST1O60507 370 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 SASH3O75995 380 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 KRT33AO76009 404 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 PNMTP11086 282 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 HTR2AP28223 471 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 AQP1P29972 269 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 EGR4Q05215 589 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 PGGHGQ32M88 737 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 GLIPR1L2Q4G1C9 344 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 ALG10BQ5I7T1 473 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 METTL21CQ5VZV1 264 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 ULK3Q6PHR2 472 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 COMTD1Q86VU5 262 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 ARMC8Q8IUR7 673 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 CIARTQ8N365 385 aaPredicted RBP14.25□□□□□ -0.13
CLN8-206ENST00000523237 C11orf65Q8NCR3 313 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 SLC38A4Q969I6 547 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 KTI12Q96EK9 354 aaPredicted RBP14.25□□□□□ -0.13
CLN8-206ENST00000523237 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 ANKRD27Q96NW4 1050 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 PTDSS2Q9BVG9 487 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 ALG2Q9H553 416 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 EVA1AQ9H8M9 152 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 SLC17A5Q9NRA2 495 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 SELENONQ9NZV5 590 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 POU2F3Q9UKI9 436 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 AMDHD2Q9Y303 409 aa14.25□□□□□ -0.13
CLN8-206ENST00000523237 MAGED1Q9Y5V3 778 aaPredicted RBP14.25□□□□□ -0.13
CLN8-206ENST00000523237 HEATR1Q9H583 2144 aaKnown RBP14.24□□□□□ -0.13
CLN8-206ENST00000523237 TRIM64A6NGJ6 449 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 TRIM64BA6NI03 449 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 M0R1B8 84 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 CD40P25942 277 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 RGS8P57771 180 aaPredicted RBP14.24□□□□□ -0.13
CLN8-206ENST00000523237 RBBP4Q09028 425 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 NFYCQ13952 458 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 ETFDHQ16134 617 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 CYP51A1Q16850 503 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 FAM69AQ5T7M9 428 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 SLC22A25Q6T423 547 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 KLHL24Q6TFL4 600 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 RETREG3Q86VR2 466 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 DEPDC4Q8N2C3 294 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 WDR31Q8NA23 367 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 SLC47A1Q96FL8 570 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 CGREF1Q99674 301 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 TMEM27Q9HBJ8 222 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 ZFHX3Q15911 3703 aa14.24□□□□□ -0.13
CLN8-206ENST00000523237 ZNF587BE7ETH6 402 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 AIM2O14862 343 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 SMAD7O15105 426 aaKnown RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 MFN2O95140 757 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 WNT11O96014 354 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 HEXAP06865 529 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 ZNF43P17038 809 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 CDH2P19022 906 aaPredicted RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 CDKN1AP38936 164 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 SELENOPP49908 381 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 MTPNP58546 118 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 PRPS1P60891 318 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 LTBQ06643 244 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 NIPAL3Q6P499 406 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 Q71RC1 249 aaPredicted RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 NET1Q7Z628 596 aaPredicted RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 DTX2Q86UW9 622 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 RANBP3LQ86VV4 465 aaPredicted RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 PTOV1Q86YD1 416 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 EPHX4Q8IUS5 362 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 RNF217Q8TC41 542 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 TRAF4Q9BUZ4 470 aaPredicted RBP14.23□□□□□ -0.13
CLN8-206ENST00000523237 C1QTNF6Q9BXI9 259 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 GRIP2Q9C0E4 1043 aa14.23□□□□□ -0.13
CLN8-206ENST00000523237 TRAV36DV7A0A075B6V5 113 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 FZD7O75084 574 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 HOXB4P17483 251 aaPredicted RBP14.22□□□□□ -0.13
CLN8-206ENST00000523237 PCBP3P57721 371 aaKnown RBP14.22□□□□□ -0.13
CLN8-206ENST00000523237 DMTNQ08495 405 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 SPOCK1Q08629 439 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 MFSD13AQ14CX5 517 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 OR1Q1Q15612 314 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 KRTAP21-3Q3LHN1 58 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 AGAP6Q5VW22 663 aa14.22□□□□□ -0.13
CLN8-206ENST00000523237 SLC30A8Q8IWU4 369 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms