RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 IKZF5Q9H5V7 419 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 INTS9Q9NV88 658 aaKnown RBP18.14■□□□□ 0.49
SDCBP-209ENST00000522243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-209ENST00000522243 AMDHD2Q9Y303 409 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 PNMTP11086 282 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 PRKAR1BP31321 381 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 TTKP33981 857 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 FABP6P51161 128 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 SQLEQ14534 574 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 ETFDHQ16134 617 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 HIKESHIQ53FT3 197 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 REEP3Q6NUK4 255 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 NIPAL3Q6P499 406 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 EPHX4Q8IUS5 362 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 DEPDC4Q8N2C3 294 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 C17orf78Q8N4C9 275 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 MFSD8Q8NHS3 518 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 KTI12Q96EK9 354 aaPredicted RBP18.13■□□□□ 0.49
SDCBP-209ENST00000522243 CACNG6Q9BXT2 260 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 REG4Q9BYZ8 158 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 SEC14L4Q9UDX3 406 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
SDCBP-209ENST00000522243 CR1P17927 2039 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 TRBV5-3A0A0A0MS03 114 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 FTCDNL1E5RQL4 147 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 SSX4O60224 188 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 VAMP5O95183 116 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 LGI1O95970 557 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 CBLP22681 906 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 PPIBP23284 216 aaKnown RBP18.12■□□□□ 0.49
SDCBP-209ENST00000522243 HTR2AP28223 471 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 GTF2E2P29084 291 aaKnown RBP18.12■□□□□ 0.49
SDCBP-209ENST00000522243 AQP1P29972 269 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 PRPS1P60891 318 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 IRX1P78414 480 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-209ENST00000522243 SCARB2Q14108 478 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 KLHL24Q6TFL4 600 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 FBXL14Q8N1E6 418 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 RNF217Q8TC41 542 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 HTRA1Q92743 480 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 SLC35B4Q969S0 331 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 ALKBH3Q96Q83 286 aaPredicted RBP18.12■□□□□ 0.49
SDCBP-209ENST00000522243 GRIP2Q9C0E4 1043 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 PIF1Q9H611 641 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 CBLN4Q9NTU7 201 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 RASD1Q9Y272 281 aa18.12■□□□□ 0.49
SDCBP-209ENST00000522243 NAV3Q8IVL0 2385 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 A0A1B0GWA3 101 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 UPK3AO75631 287 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 ATP4BP51164 291 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 CLDN17P56750 224 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 PPP2R2BQ00005 443 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 DHRS4L2Q6PKH6 230 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 LINGO2Q7L985 606 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 ABHD12BQ7Z5M8 362 aaPredicted RBP18.11■□□□□ 0.49
SDCBP-209ENST00000522243 KRT73Q86Y46 540 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 MUC15Q8N387 334 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 SPATA5L1Q9BVQ7 753 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 TMEM45AQ9NWC5 275 aa18.11■□□□□ 0.49
SDCBP-209ENST00000522243 FN1P02751 2386 aaKnown RBP18.11■□□□□ 0.49
SDCBP-209ENST00000522243 EVPLLA8MZ36 301 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 ZNF587BE7ETH6 402 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 WNT11O96014 354 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 GPX2P18283 190 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 KRTAP1-1Q07627 177 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 TBRG1Q3YBR2 411 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 ALG10BQ5I7T1 473 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 C11orf71Q6IPW1 123 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 C6orf89Q6UWU4 347 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 DLEU7Q6UYE1 221 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 OR1K1Q8NGR3 316 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 CKAP2Q8WWK9 683 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 TAAR8Q969N4 342 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 WFDC6Q9BQY6 131 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 CPPED1Q9BRF8 314 aaPredicted RBP18.1■□□□□ 0.49
SDCBP-209ENST00000522243 TMEM38AQ9H6F2 299 aa18.1■□□□□ 0.49
SDCBP-209ENST00000522243 IGKV1D-42A0A075B6H8 117 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ATP6V1G2-DDX39BF2Z307 99 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 M0R082 166 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ZNF43P17038 809 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 SLC6A2P23975 617 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 TUBA1BP68363 451 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 TUBA4AP68366 448 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ADRM1Q16186 407 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 RUNDC3AQ59EK9 446 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 DNM1P46Q6ZS02 220 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 TUBA1AQ71U36 451 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 HDXQ7Z353 690 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 LSMEM1Q8N8F7 131 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ZNF417Q8TAU3 575 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 SLC38A4Q969I6 547 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 MAGEB18Q96M61 343 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ADAD1Q96M93 576 aaKnown RBP18.09■□□□□ 0.49
SDCBP-209ENST00000522243 ZNF587Q96SQ5 575 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-209ENST00000522243 FKRPQ9H9S5 495 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 C12orf10Q9HB07 376 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 BARX1Q9HBU1 254 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-209ENST00000522243 CORO2BQ9UQ03 480 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 MOKQ9UQ07 419 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms