RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SMAD9O15198 467 aaKnown RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 SAGP10523 405 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 POU2F1P14859 743 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 GSSP48637 474 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 NUP107P57740 925 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 SF3B4Q15427 424 aaKnown RBP eCLIP21.6■■□□□ 1.052e-9■■■□□ 17.6
PVT1-212ENST00000521951 IGFBP7Q16270 282 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 ACSF3Q4G176 576 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 ANKRD34AQ69YU3 496 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 PPP4R4Q6NUP7 873 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 OR5J2Q8NH18 312 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 FNDC9Q8TBE3 224 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 TRIB1Q96RU8 372 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 NAA11Q9BSU3 229 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 DGCR6LQ9BY27 220 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 RNPEPL1Q9HAU8 725 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 MRPL39Q9NYK5 338 aaKnown RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 CLCF1Q9UBD9 225 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 MCTS1Q9ULC4 181 aaKnown RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 PDLIM1O00151 329 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 HIST1H2ABP04908 130 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 FPR3P25089 353 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 ACVR2AP27037 513 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 PTGER4P35408 488 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 TSPAN31Q12999 210 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 MRPL49Q13405 166 aaKnown RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 OTUD3Q5T2D3 398 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 RTL6Q6ICC9 239 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 H1FNTQ75WM6 255 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 HIST3H2AQ7L7L0 130 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 EPHX4Q8IUS5 362 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 CCDC103Q8IW40 242 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 SCAIQ8N9R8 606 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 HIST1H2ACQ93077 130 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 GTPBP3Q969Y2 492 aaKnown RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 CIB1Q99828 191 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 TP63Q9H3D4 680 aaPredicted RBP21.6■■□□□ 1.05
PVT1-212ENST00000521951 CALHM2Q9HA72 323 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 CHST11Q9NPF2 352 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 TINAGQ9UJW2 476 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 ZNF175Q9Y473 711 aa21.6■■□□□ 1.05
PVT1-212ENST00000521951 ARHGAP21Q5T5U3 1957 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 AQP7P3A6NL99 342 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 TGM6O95932 706 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 HOXD4P09016 255 aaPredicted RBP21.59■■□□□ 1.05
PVT1-212ENST00000521951 ANXA8P13928 327 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 SLC9A3P48764 834 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 P2RY4P51582 365 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 PMS2P3Q13401 168 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 C1orf185Q5T7R7 199 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 RPTNQ6XPR3 784 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 C3P1Q6ZMU1 363 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 FCRLAQ7L513 359 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 OAFQ86UD1 273 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 GALNT11Q8NCW6 608 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 OR13C2Q8NGS9 318 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 NIPSNAP1Q9BPW8 284 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 PRRG4Q9BZD6 226 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 GABARAPL1Q9H0R8 117 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 OSGIN2Q9Y236 505 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 B3GALT5Q9Y2C3 310 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 FAM215AQ9Y5M1 114 aa21.59■■□□□ 1.05
PVT1-212ENST00000521951 UNC119BA6NIH7 251 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 SLC22A20A6NK97 555 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 PLPP3O14495 311 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 RAMP1O60894 148 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 AQP8O94778 261 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 FHL1Q13642 323 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 NSUN5P2Q63ZY6 315 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 FAHD1Q6P587 224 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 NANOGNBQ7Z5D8 188 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 ATG16L2Q8NAA4 619 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 OR51A7Q8NH64 312 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 SDCCAG3Q96C92 435 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 TNFRSF13CQ96RJ3 184 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 SMURF2Q9HAU4 748 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 MED12LQ86YW9 2145 aa21.58■■□□□ 1.04
PVT1-212ENST00000521951 TRAV27A0A087WT01 109 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 CD8B2A6NJW9 211 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 MS4A18H0YCH9 400 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 BLOC1S5-TXNDC5H3BN57 136 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 PTP4A3O75365 173 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 ATP6V1G2O95670 118 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 ADAP00813 363 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 DAPP51397 102 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 SLC34A1Q06495 639 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 MS4A18Q3C1V0 323 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 ZBED5Q49AG3 693 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 ADPRHL1Q8NDY3 354 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 TAS2R5Q9NYW4 299 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 SH3BGRL2Q9UJC5 107 aa21.57■■□□□ 1.04
PVT1-212ENST00000521951 CYTIPO60759 359 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 TSPAN19P0C672 248 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 TRIP10Q15642 601 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 TMEM225Q6GV28 225 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 P4HA3Q7Z4N8 544 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 KDM8Q8N371 416 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 RPRMLQ8N4K4 120 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 RNF128Q8TEB7 428 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 WNT2BQ93097 391 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms