RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SEC14L4Q9UDX3 406 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 ST6GALNAC2Q9UJ37 374 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 AP3M1Q9Y2T2 418 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 CELSR1Q9NYQ6 3014 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 NME4O00746 187 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 KLF4O43474 513 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 VAMP5O95183 116 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 THY1P04216 161 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 PTNP21246 168 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 LOXP28300 417 aaPredicted RBP18.23■□□□□ 0.51
TRIM35-203ENST00000521253 GTF2E2P29084 291 aaKnown RBP18.23■□□□□ 0.51
TRIM35-203ENST00000521253 KDELR2P33947 212 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 LIPEQ05469 1076 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 LRRC23Q53EV4 343 aaPredicted RBP18.23■□□□□ 0.51
TRIM35-203ENST00000521253 ALKBH2Q6NS38 261 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 PIGWQ7Z7B1 504 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 HS3ST6Q96QI5 342 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 PCDHAC1Q9H158 963 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 MALT1Q9UDY8 824 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 BAG5Q9UL15 447 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 RASD1Q9Y272 281 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 SH3GLB1Q9Y371 365 aa18.23■□□□□ 0.51
TRIM35-203ENST00000521253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ENO4A6NNW6 628 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 M0R082 166 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 CHP2O43745 196 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 LYPD3O95274 346 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 IFNA14P01570 189 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 TNFRSF1BP20333 461 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 PRDX6P30041 224 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 GRPRP30550 384 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 TAB1Q15750 504 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 CYBRD1Q53TN4 286 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 BEX5Q5H9J7 111 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 LINC00114Q6XXX2 140 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 WDR88Q6ZMY6 472 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 CREB3L2Q70SY1 520 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 AAED1Q7RTV5 226 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 CARM1Q86X55 608 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 KDM8Q8N371 416 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ZNF433Q8N7K0 673 aaPredicted RBP18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ZNF417Q8TAU3 575 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ADAMTS16Q8TE57 1224 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 HSD17B8Q92506 261 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ZNF587Q96SQ5 575 aaPredicted RBP18.22■□□□□ 0.51
TRIM35-203ENST00000521253 EPYCQ99645 322 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 TMEM43Q9BTV4 400 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 ASB6Q9NWX5 421 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 PLEKHA6Q9Y2H5 1048 aa18.22■□□□□ 0.51
TRIM35-203ENST00000521253 TRAPPC13A5PLN9 417 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 CBLP22681 906 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 IST1P53990 364 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 FOXG1P55316 489 aaPredicted RBP18.21■□□□□ 0.51
TRIM35-203ENST00000521253 LTBQ06643 244 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 FAPQ12884 760 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 TSPO2Q5TGU0 170 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 PAMR1Q6UXH9 720 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 EPHX4Q8IUS5 362 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 OR6S1Q8NH40 331 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 NINJ1Q92982 152 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 USB1Q9BQ65 265 aaKnown RBP18.21■□□□□ 0.51
TRIM35-203ENST00000521253 SLC7A10Q9NS82 523 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 B3GALT5Q9Y2C3 310 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 ARL2BPQ9Y2Y0 163 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 PRR14LQ5THK1 2151 aa18.21■□□□□ 0.51
TRIM35-203ENST00000521253 MAP1AP78559 2803 aaPredicted RBP18.21■□□□□ 0.51
TRIM35-203ENST00000521253 PDLIM1O00151 329 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 BGLAPP02818 100 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 GGT1P19440 569 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 GSK3BP49841 420 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 PSME3P61289 254 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 STK11Q15831 433 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 H1FNTQ75WM6 255 aaPredicted RBP18.2■□□□□ 0.5
TRIM35-203ENST00000521253 ALG2Q9H553 416 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 CCM2LQ9NUG4 571 aaPredicted RBP18.2■□□□□ 0.5
TRIM35-203ENST00000521253 B3GAT1Q9P2W7 334 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 UPB1Q9UBR1 384 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 SLC7A7Q9UM01 511 aa18.2■□□□□ 0.5
TRIM35-203ENST00000521253 LRRN3E7EW58 273 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 SHOX2O60902 331 aaPredicted RBP18.19■□□□□ 0.5
TRIM35-203ENST00000521253 RAD51DO75771 328 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 ITGA5P08648 1049 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 OR1E2P47887 323 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 MFSD13AQ14CX5 517 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 TESK1Q15569 626 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 SEZ6L2Q6UXD5 910 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 DEF8Q6ZN54 512 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 PLPPR2Q96GM1 343 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 SLC41A3Q96GZ6 507 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 TPD52L3Q96J77 140 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 OXGR1Q96P68 337 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 MOGAT1Q96PD6 335 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 SLCO5A1Q9H2Y9 848 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 TAS2R16Q9NYV7 291 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 ABCD2Q9UBJ2 740 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 EDARQ9UNE0 448 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 CORINQ9Y5Q5 1042 aa18.19■□□□□ 0.5
TRIM35-203ENST00000521253 CIB4A0PJX0 185 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 CXCR6O00574 342 aa18.18■□□□□ 0.5
TRIM35-203ENST00000521253 NDUFAB1O14561 156 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms