RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CALHM3Q86XJ0 350 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 PCP2Q8IVA1 136 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 FTMTQ8N4E7 242 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 MRPS31Q92665 395 aaKnown RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 SYAP1Q96A49 352 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 SH3YL1Q96HL8 342 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 NDFIP1Q9BT67 221 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 EDEM2Q9BV94 578 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 SELENOIQ9C0D9 397 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 SMYD3Q9H7B4 428 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 ZNF430Q9H8G1 570 aaPredicted RBP2.12□□□□□ -2.07
SKP1-207ENST00000520417 ELOVL3Q9HB03 270 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 SIRT7Q9NRC8 400 aa2.12□□□□□ -2.07
SKP1-207ENST00000520417 AATFQ9NY61 560 aaKnown RBP eCLIP2.12□□□□□ -2.07
SKP1-207ENST00000520417 IGLV11-55A0A075B6I3 123 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 A0A0G2JLM5 398 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 A0A1B0GWJ7 208 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 A0A1W2PNV4 684 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 NPIPA7E9PJI5 369 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 RS1O15537 224 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 HCRTR1O43613 425 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ENTPD5O75356 428 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ADCY5O95622 1261 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 GUCA1CO95843 209 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 UGT2B4P06133 528 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 DCNP07585 359 aaKnown RBP2.11□□□□□ -2.07
SKP1-207ENST00000520417 NPIPA8P0DM63 369 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 HSPA5P11021 654 aaKnown RBP2.11□□□□□ -2.07
SKP1-207ENST00000520417 RPA2P15927 270 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 CXCR2P25025 360 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 PSMA5P28066 241 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SHMT2P34897 504 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 CA8P35219 290 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 CXCL5P42830 114 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ELP6Q0PNE2 266 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SNTB2Q13425 540 aaKnown RBP2.11□□□□□ -2.07
SKP1-207ENST00000520417 PDK4Q16654 411 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 TMEM183BQ1AE95 376 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 GGTA1PQ4G0N0 100 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 KLF17Q5JT82 389 aaPredicted RBP2.11□□□□□ -2.07
SKP1-207ENST00000520417 TIGD3Q6B0B8 471 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 CTRB2Q6GPI1 263 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 FAM71F2Q6NXP2 309 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ZNF547Q8IVP9 402 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ZDHHC21Q8IVQ6 265 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 TMEM183AQ8IXX5 376 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SLC38A6Q8IZM9 456 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 Q8N976 141 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 OSTF1Q92882 214 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 C7orf34Q96L11 122 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 NPAS2Q99743 824 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 OMDQ99983 421 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SLC35A5Q9BS91 424 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 ALG12Q9BV10 488 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 RHBGQ9H310 441 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SLC17A5Q9NRA2 495 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 NUDT15Q9NV35 164 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 RNF14Q9UBS8 474 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 CHRNA9Q9UGM1 479 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SH3BGRL2Q9UJC5 107 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 NPIPA1Q9UND3 350 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 SNX6Q9UNH7 406 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 KIF16BQ96L93 1317 aa2.11□□□□□ -2.07
SKP1-207ENST00000520417 XPO1O14980 1071 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 AGPAT2O15120 278 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 SUPT3HO75486 399 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 IGKV1D-16P01601 117 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 POLR2EP19388 210 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 PAX7P23759 505 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 GDI1P31150 447 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 RDXP35241 583 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 SOX6P35712 828 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 UBE2AP49459 152 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 RGS4P49798 205 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 DAP3P51398 398 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 HSPA2P54652 639 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 KLHL30Q0D2K2 578 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 SELPLGQ14242 412 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 MESDQ14696 234 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 RFX4Q33E94 735 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 NADK2Q4G0N4 442 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 TP53I3Q53FA7 332 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 LRRC10Q5BKY1 277 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 C11orf71Q6IPW1 123 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 CCDC80Q76M96 950 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 PAQR7Q86WK9 346 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 CCDC65Q8IXS2 484 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 CLEC4FQ8N1N0 589 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 SYT14Q8NB59 555 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 OR4D9Q8NGE8 314 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 MAIP1Q8WWC4 291 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 FAM3CQ92520 227 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 DTNBP1Q96EV8 351 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 FCRL1Q96LA6 429 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 BMFQ96LC9 184 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 SENP8Q96LD8 212 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 TTC25Q96NG3 672 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 P2RY13Q9BPV8 354 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 POLR1EQ9GZS1 481 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 SIAEQ9HAT2 523 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms