RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 FN3KQ9H479 309 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 TRIM45Q9H8W5 580 aaPredicted RBP4.12□□□□□ -1.75
PABPC1-212ENST00000519622 MTHFD2LQ9H903 347 aaPredicted RBP4.12□□□□□ -1.75
PABPC1-212ENST00000519622 UCK1Q9HA47 277 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ADGRL4Q9HBW9 690 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ADAP2Q9NPF8 381 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 SLC2A4RGQ9NR83 387 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 POLE3Q9NRF9 147 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ABCB10Q9NRK6 738 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 CMC2Q9NRP2 79 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ASB6Q9NWX5 421 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 SIDT1Q9NXL6 827 aaKnown RBP4.12□□□□□ -1.75
PABPC1-212ENST00000519622 CHRNA9Q9UGM1 479 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 SERTAD3Q9UJW9 196 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 FBXL4Q9UKA2 621 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 EXOSC1Q9Y3B2 195 aaKnown RBP4.12□□□□□ -1.75
PABPC1-212ENST00000519622 PEX16Q9Y5Y5 336 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 SPIN1Q9Y657 262 aaPredicted RBP4.12□□□□□ -1.75
PABPC1-212ENST00000519622 CSNK1G3Q9Y6M4 447 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ZNF780BQ9Y6R6 833 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 ADAMTS9Q9P2N4 1935 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 HEATR5AQ86XA9 2040 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 CEP290O15078 2479 aa4.12□□□□□ -1.75
PABPC1-212ENST00000519622 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 A0A1W2PPC4 97 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SMIM30A4D0T7 59 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 C17orf51A8MQB3 221 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 FAM171A2A8MVW0 826 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 LOC110117498-PIK3R3F6TDL0 507 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GTPBP1O00178 669 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GABRPO00591 440 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 POLR1CO15160 346 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 TNRC18O15417 2968 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 HOXA3O43365 443 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 MBTPS2O43462 519 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CHP2O43745 196 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 STX11O75558 287 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CDRT1O95170 752 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 AGR2O95994 175 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 TNFP01375 233 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 DBIP07108 87 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 HNRNPCP07910 306 aaKnown RBP eCLIP4.11□□□□□ -1.755e-7■■■■□ 21.2
PABPC1-212ENST00000519622 THEGLP0DJG4 465 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GLULP15104 373 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CSRP1P21291 193 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GALP22466 123 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SDC2P34741 201 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 BTCP35070 178 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CAPZBP47756 277 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 FASLGP48023 281 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SLC9A3P48764 834 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GPR143P51810 404 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 AGFG1P52594 562 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SLC16A1P53985 500 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GFERP55789 205 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 VSX2P58304 361 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 RPS11P62280 158 aaKnown RBP eCLIP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 POU6F2P78424 691 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 BTG2P78543 158 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 MAT1AQ00266 395 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 FUT7Q11130 342 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ILF3Q12906 894 aaKnown RBP eCLIP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 HNRNPA0Q13151 305 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CBX3Q13185 183 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 MRPL49Q13405 166 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ASAH1Q13510 395 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 C1orf61Q13536 156 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 IL10RAQ13651 578 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CRMP1Q14194 572 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GGTLC2Q14390 218 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 KRT33BQ14525 404 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 GPR68Q15743 365 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CD226Q15762 336 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 BCL2A1Q16548 175 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 TIMM50Q3ZCQ8 353 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 AMZ1Q400G9 498 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 KLHL22Q53GT1 634 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 EIPR1Q53HC9 387 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CEP78Q5JTW2 689 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 PDZK1Q5T2W1 519 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ZNF684Q5T5D7 378 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 FAM27D1Q5T7N8 215 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ATAD3BQ5T9A4 648 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 LINC01590Q5TEZ4 76 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 PLBD1Q6P4A8 553 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ZNF613Q6PF04 617 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 CCBE1Q6UXH8 406 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 APOOLQ6UXV4 268 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 HSDL2Q6YN16 418 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ABHD13Q7L211 337 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 PXKQ7Z7A4 578 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 LHFPL3Q86UP9 236 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 UBQLNLQ8IYU4 475 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SAMD14Q8IZD0 417 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 RNF113BQ8IZP6 322 aaKnown RBP4.11□□□□□ -1.75
PABPC1-212ENST00000519622 LSMEM1Q8N8F7 131 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 ZNF321PQ8N8H1 164 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 SLC37A3Q8NCC5 494 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 C17orf47Q8NEP4 570 aa4.11□□□□□ -1.75
PABPC1-212ENST00000519622 FANK1Q8TC84 345 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms