RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 CDC73Q6P1J9 531 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 TMPPEQ6ZT21 453 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 ZNF614Q8N883 585 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 MSI2Q96DH6 328 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 ASB9Q96DX5 294 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 PIMREGQ9BSJ6 248 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 BHLHE41Q9C0J9 482 aaPredicted RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 RNPEPL1Q9HAU8 725 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 NOSIPQ9Y314 301 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 FKBP7Q9Y680 259 aa16.65■□□□□ 0.26
CTNNA1-213ENST00000519113 PRSS51A0A1B0GVH4 220 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 A0A1W2PR80 420 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 VWC2LB2RUY7 222 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 SULT2B1O00204 365 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF264O43296 627 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 H6PDO95479 791 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 LAMP1P11279 417 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 MSX2P35548 267 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 NR4A2P43354 598 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 DIO1P49895 249 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 CCR4P51679 360 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 LIPEQ05469 1076 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 RUNX1T1Q06455 604 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 BNIP2Q12982 314 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 CCNIQ14094 377 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 LRIF1Q5T3J3 769 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 FAM156AQ8NDB6 213 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 SLC26A7Q8TE54 656 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF524Q96C55 264 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 ANKRD27Q96NW4 1050 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 MUS81Q96NY9 551 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 KCTD14Q9BQ13 255 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 ACTRT3Q9BYD9 372 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 PAIP1Q9H074 479 aaKnown RBP16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 BTNL2Q9UIR0 455 aa16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 FAF1Q9UNN5 650 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-213ENST00000519113 GPR171O14626 319 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 ACOT8O14734 319 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 KIAA0513O60268 411 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 KRT36O76013 467 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 LY6HO94772 140 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 UBL4AP11441 157 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 EFNA1P20827 205 aaPredicted RBP16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 MS4A2Q01362 244 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 GABRA6Q16445 453 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 RABL3Q5HYI8 236 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 ABLIM2Q6H8Q1 611 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 ANKRD46Q86W74 232 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 BHLHE22Q8NFJ8 381 aaPredicted RBP16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 ST8SIA1Q92185 356 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 ZHX1-C8orf76Q96EF9 292 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 LRGUKQ96M69 825 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 PANX1Q96RD7 426 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 THUMPD3Q9BV44 507 aaKnown RBP16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 PRR14Q9BWN1 585 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 C1QTNF6Q9BXI9 259 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 TRIM15Q9C019 465 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 MUC13Q9H3R2 512 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 SIRT3Q9NTG7 399 aaPredicted RBP16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 VAPAQ9P0L0 249 aa16.63■□□□□ 0.25
CTNNA1-213ENST00000519113 MALRD1Q5VYJ5 2156 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 NPIPB9F8W1W9 429 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 MRPL33O75394 65 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 CPSF4O95639 269 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 TGFAP01135 160 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 GSK3BP49841 420 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 RCN1Q15293 331 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 DHFR2Q86XF0 187 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 RFLNBQ8N5W9 214 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 NATD1Q8N6N6 113 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 OR56A1Q8NGH5 318 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 SLC25A43Q8WUT9 341 aaPredicted RBP16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 TMEM234Q8WY98 164 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 C3orf49Q96BT1 292 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 CCDC115Q96NT0 180 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 ECSITQ9BQ95 431 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 QRSL1Q9H0R6 528 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 PCDHAC1Q9H158 963 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 S100A14Q9HCY8 104 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 MYOZ1Q9NP98 299 aaPredicted RBP16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 PCDHGB4Q9UN71 923 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 PCDHB14Q9Y5E9 798 aa16.62■□□□□ 0.25
CTNNA1-213ENST00000519113 LOC390937A0A1W2PQ73 354 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 RNASET2O00584 256 aaKnown RBP16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 TCF21O43680 179 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 SCN2BO60939 215 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 CCT3P49368 545 aaKnown RBP16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 ERFP50548 548 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 SESN3P58005 492 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 MTPNP58546 118 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 MERTKQ12866 999 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 IQCCQ4KMZ1 466 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 SYT14P1Q58G82 188 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 C1QTNF12Q5T7M4 302 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF621Q6ZSS3 439 aa16.61■□□□□ 0.25
CTNNA1-213ENST00000519113 ZNF540Q8NDQ6 660 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms