RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ABTB1Q969K4 478 aaPredicted RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 AGAP4Q96P64 663 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 XPO6Q96QU8 1125 aaKnown RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 ZNF426Q9BUY5 554 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 FAM49AQ9H0Q0 323 aaPredicted RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 SYT4Q9H2B2 425 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 RNF121Q9H920 327 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 ZNF556Q9HAH1 456 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 GPATCH2LQ9NWQ4 482 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 PTTG2Q9NZH5 202 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 EIF3KQ9UBQ5 218 aaKnown RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 NXT1Q9UKK6 140 aaKnown RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 PPP1R3CQ9UQK1 317 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 NSG2Q9Y328 171 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 ZNF175Q9Y473 711 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 POLR3HQ9Y535 204 aaPredicted RBP5.17□□□□□ -1.58
SQLE-203ENST00000518931 SAR1BQ9Y6B6 198 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 STK36Q9NRP7 1315 aa5.17□□□□□ -1.58
SQLE-203ENST00000518931 CPDO75976 1380 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 RAB3GAP2Q9H2M9 1393 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 A0A1W2PQ67 120 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 A0A1W2PRF3 423 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 A0A1W2PRM7 423 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 CLDN34H7C241 214 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 B4GALT5O43286 388 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 CHST1O43916 411 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 LRATO95237 230 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 PSMG1O95456 288 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 TMEM50AO95807 157 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 ATP1A1P05023 1023 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 GP1BAP07359 652 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 NR2C1P13056 603 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 CBR1P16152 277 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 KITLGP21583 273 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 CA4P22748 312 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 DCKP27707 260 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 IFNA8P32881 189 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 SFTPDP35247 375 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 MAGEA3P43357 314 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 MAGEA6P43360 314 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 SPCS3P61009 180 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 GUCY2DQ02846 1103 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 KLRC3Q07444 240 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 MGAT3Q09327 533 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 PDIA2Q13087 525 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 HLA-BQ31612 363 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 UTF1Q5T230 341 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 KCTD16Q68DU8 428 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 FCRLAQ7L513 359 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 TRMT1LQ7Z2T5 733 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 ANKRD37Q7Z713 158 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 KCNMB4Q86W47 210 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 NR2C2APQ86WQ0 139 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 RNF113BQ8IZP6 322 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 NATD1Q8N6N6 113 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 B3GNT7Q8NFL0 401 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 OR2D3Q8NGH3 330 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 OR10Z1Q8NGY1 313 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 LRRC15Q8TF66 581 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 DNAJB3Q8WWF6 145 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 TAAR8Q969N4 342 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 PACRGQ96M98 296 aaPredicted RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 WFIKKN1Q96NZ8 548 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 MBOAT4Q96T53 435 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 PRRT1Q99946 306 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 SYT15Q9BQS2 421 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 UTP23Q9BRU9 249 aaKnown RBP5.16□□□□□ -1.58
SQLE-203ENST00000518931 RSG1Q9BU20 258 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 C5orf66Q9H5L9 145 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 HRASLSQ9HDD0 168 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 SLC52A3Q9NQ40 469 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 DIABLOQ9NR28 239 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 INPP5EQ9NRR6 644 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 ERGIC3Q9Y282 383 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 AMDHD2Q9Y303 409 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 WIF1Q9Y5W5 379 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 ETV7Q9Y603 341 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 USP47Q96K76 1375 aa5.16□□□□□ -1.58
SQLE-203ENST00000518931 CPSF1Q10570 1443 aaKnown RBP5.15□□□□□ -1.58
SQLE-203ENST00000518931 PVALEFA0A1B0GWK0 134 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 H0YL77 283 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 SIRPB1O00241 398 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 PDHXO00330 501 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 CCSO14618 274 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 PRMT5O14744 637 aaPredicted RBP5.15□□□□□ -1.59
SQLE-203ENST00000518931 ZBTB5O15062 677 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 SLC16A4O15374 487 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 BUB3O43684 328 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 SLC19A2O60779 497 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 WDPCPO95876 746 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 HLA-HP01893 362 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 IFNW1P05000 195 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 PGCP20142 388 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 BCKDHBP21953 392 aa5.15□□□□□ -1.59
SQLE-203ENST00000518931 CXCR2P25025 360 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms