RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PIP5K1BO14986 540 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 SKAP2O75563 359 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 BCL10O95999 233 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 CBR1P16152 277 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TACR3P29371 465 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 CCT5P48643 541 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TMEM33P57088 247 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TUBA1BP68363 451 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TUBA4AP68366 448 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 HPCAP84074 193 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 IFFO1Q0D2I5 559 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 SNTB2Q13425 540 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 ATP6AP1LQ52LC2 224 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TMEM225Q6GV28 225 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TUBA1AQ71U36 451 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 CMIPQ8IY22 773 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 BPIFB2Q8N4F0 458 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TMEM99Q8N816 258 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 CCDC63Q8NA47 563 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 MIPOL1Q8TD10 442 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 TWIST2Q8WVJ9 160 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 RDH5Q92781 318 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 LINC00470Q9BZP3 86 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 NARFLQ9H6Q4 476 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 SEC61A2Q9H9S3 476 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 SLC52A3Q9NQ40 469 aa9.88□□□□□ -0.83
TRAPPC9-203ENST00000517667 VWFP04275 2813 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 A0A0X1KG70 313 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 RNF103-CHMP3A0A140T963 221 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 PLIN3O60664 434 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 BCAS1O75363 584 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 AKR7A3O95154 331 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 GSNP06396 782 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 IGFBP1P08833 259 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 CELA3BP08861 270 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 CPA3P15088 417 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 ECHS1P30084 290 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 SELENOPP49908 381 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 MRPS11P82912 194 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 MYBPC1Q00872 1141 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 CEACAM7Q14002 265 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 OR7A5Q15622 319 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 ELFN2Q5R3F8 820 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 KRT80Q6KB66 452 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 FRRS1Q6ZNA5 592 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 OLIG3Q7RTU3 272 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 C1QL2Q7Z5L3 287 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 CCDC36Q8IYA8 594 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 OR4M2Q8NGB6 313 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 MZB1Q8WU39 189 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 ROPN1LQ96C74 230 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF416Q9BWM5 594 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 TAPBPLQ9BX59 468 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 OR51I1Q9H343 314 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 NELFAQ9H3P2 528 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 PPCSQ9HAB8 311 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 NTN4Q9HB63 628 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 REV1Q9UBZ9 1251 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 MID2Q9UJV3 735 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 PRDM4Q9UKN5 801 aa9.87□□□□□ -0.83
TRAPPC9-203ENST00000517667 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZC3H12DA2A288 527 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 RPL36A-HNRNPH2H7BZ11 118 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 J3QLI3 93 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 AP3D1O14617 1153 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 SCN2BO60939 215 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 PEX11AO75192 247 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 FGF4P08620 206 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 MYZAPP0CAP1 466 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 OR12D1P0DN82 309 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 HKR1P10072 659 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 NR4A1P22736 598 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 CXCR1P25024 350 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 CRHR1P34998 444 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 UBA52P62987 128 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 ROR2Q01974 943 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 PLAURQ03405 335 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 NPRL3Q12980 569 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 GNA13Q14344 377 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF311Q5JNZ3 666 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 PRAMEF8Q5VWM4 474 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 PRAMEF7Q5VXH5 474 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 CREB3L2Q70SY1 520 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 MYPOPQ86VE0 399 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 RIMKLAQ8IXN7 391 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 GSPT2Q8IYD1 628 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 KRTCAP2Q8N6L1 136 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 NANPQ8TBE9 248 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 XAGE5Q8WWM1 108 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 SLC6A7Q99884 636 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 NOX3Q9HBY0 568 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 CRLF2Q9HC73 371 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 G6PC2Q9NQR9 355 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms