RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 UFM1P61960 85 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 NAAAQ02083 359 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 MAPK11Q15759 364 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 IQCCQ4KMZ1 466 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 COX20Q5RI15 118 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 IL17RELQ6ZVW7 336 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 EPHX4Q8IUS5 362 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 ANKK1Q8NFD2 765 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 C3orf49Q96BT1 292 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 OR52E6Q96RD3 313 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 BPESC1Q9GZL8 116 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 SSU72Q9NP77 194 aaKnown RBP13.06□□□□□ -0.32
DDR1-278ENST00000515233 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 DSPPQ9NZW4 1301 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■■■□□ 17.9
DDR1-278ENST00000515233 A0A096LPI6 279 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 RPL36A-HNRNPH2H7BZ11 118 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 FRS3O43559 492 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 STAMBPO95630 424 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 KRT75O95678 551 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 IGKV3-15P01624 115 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 ALDOCP09972 364 aaKnown RBP13.05□□□□□ -0.32
DDR1-278ENST00000515233 GKN3PP0CG01 181 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 GIFP27352 417 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 MVDP53602 400 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 COPZ1P61923 177 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 VSNL1P62760 191 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 BNIP2Q12982 314 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 ZSWIM7Q19AV6 140 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 LIN52Q52LA3 116 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 LIPNQ5VXI9 398 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 SPATA19Q7Z5L4 167 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 VRK2Q86Y07 508 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 NUP37Q8NFH4 326 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 OR52P1PQ8NH57 321 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 RAB1BQ9H0U4 201 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 NELFAQ9H3P2 528 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 AIG1Q9NVV5 245 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 ADPRHL2Q9NX46 363 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 ANK2Q01484 3957 aa13.05□□□□□ -0.32
DDR1-278ENST00000515233 VSTM5A8MXK1 200 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 NR5A2O00482 541 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 TM9SF1O15321 606 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 UPK3AO75631 287 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 GSNP06396 782 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 TACSTD2P09758 323 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 CECR9P0C854 216 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 CALCRP30988 508 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 SH3BGRP55822 239 aaPredicted RBP13.04□□□□□ -0.32
DDR1-278ENST00000515233 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
DDR1-278ENST00000515233 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 CARTPTQ16568 116 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 RNF220Q5VTB9 566 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 C1orf140Q5VVS0 124 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 NIPAL3Q6P499 406 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 CADM2Q8N3J6 435 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 MFSD8Q8NHS3 518 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 STK35Q8TDR2 534 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 AENQ8WTP8 325 aaKnown RBP13.04□□□□□ -0.32
DDR1-278ENST00000515233 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
DDR1-278ENST00000515233 ALKBH3Q96Q83 286 aaPredicted RBP13.04□□□□□ -0.32
DDR1-278ENST00000515233 DOK1Q99704 481 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 SOX7Q9BT81 388 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 ZNF442Q9H7R0 627 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 P2RX2Q9UBL9 471 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
DDR1-278ENST00000515233 NBEAL1Q6ZS30 2694 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 TMEM229AB2RXF0 380 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 RFXANKO14593 260 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 ZCCHC18P0CG32 403 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 CBR1P16152 277 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 CRISP3P54108 245 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 NME5P56597 212 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 HGFACQ04756 655 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 STX3Q13277 289 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 CR1LQ2VPA4 569 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 PRAMEF8Q5VWM4 474 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 PRAMEF7Q5VXH5 474 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 ZNF786Q8N393 782 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 RFLNBQ8N5W9 214 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 GLB1L3Q8NCI6 653 aaPredicted RBP13.03□□□□□ -0.32
DDR1-278ENST00000515233 PNPT1Q8TCS8 783 aaKnown RBP13.03□□□□□ -0.32
DDR1-278ENST00000515233 HPS1Q92902 700 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 ARMC7Q9H6L4 198 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 ZNF232Q9UNY5 417 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
DDR1-278ENST00000515233 A0A096LPE4 126 aa13.02□□□□□ -0.33
DDR1-278ENST00000515233 A0A1W2PPZ6 126 aa13.02□□□□□ -0.33
DDR1-278ENST00000515233 TMEM129A0AVI4 362 aa13.02□□□□□ -0.33
DDR1-278ENST00000515233 SDHDO14521 159 aa13.02□□□□□ -0.33
DDR1-278ENST00000515233 LILRA1O75019 489 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms