RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 CXCL10P02778 98 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 TRA2BP62995 288 aaKnown RBP13.33□□□□□ -0.28
TRIO-222ENST00000515144 DMBX1Q8NFW5 382 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 ABHD4Q8TB40 342 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 NUDT8Q8WV74 236 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 P2RY12Q9H244 342 aa13.33□□□□□ -0.28
TRIO-222ENST00000515144 B4DXG7 233 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 DVL2O14641 736 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 MMP2P08253 660 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 MSR1P21757 451 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 IL2RGP31785 369 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 GOSR2O14653 212 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PTGER4P35408 488 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 REEP5Q00765 189 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 METTL4Q8N3J2 472 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 MS4A8Q9BY19 250 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 HRASLSQ9HDD0 168 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 ITGB1BP2Q9UKP3 347 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 MSL3P1P0C860 447 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 HSD17B7P56937 341 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SSTP61278 116 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TUBA1BP68363 451 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TUBA4AP68366 448 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 ANKRD34AQ69YU3 496 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TUBA1AQ71U36 451 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 CHPT1Q8WUD6 406 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TMEM255BQ8WV15 326 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 CHST8Q9H2A9 424 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PATJQ8NI35 1801 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 WNT11O96014 354 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 H2AFB2P0C5Z0 115 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 CAV3P56539 151 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 NCS1P62166 190 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 COL28A1Q2UY09 1125 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 MISPQ8IVT2 679 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 HDAC2Q92769 488 aaKnown RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 EMCNQ9ULC0 261 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TP53TG5Q9Y2B4 290 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TMEM72A0PK05 275 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 NPPBP16860 134 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 RPS18P62269 152 aaKnown RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 OTPQ5XKR4 325 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TMEM71Q6P5X7 295 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 KIF18BQ86Y91 864 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 RASD2Q96D21 266 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 LRRC61Q9BV99 259 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SOBPA7XYQ1 873 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PET100P0DJ07 73 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SLC19A1P41440 591 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TUBA3CQ13748 450 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SLCO4C1Q6ZQN7 724 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 SAT2Q96F10 170 aaPredicted RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 ZNF681Q96N22 645 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
TRIO-222ENST00000515144 NDRG3Q9UGV2 375 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PPT2Q9UMR5 302 aa13.32□□□□□ -0.28
TRIO-222ENST00000515144 PLPP1O14494 284 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 PIP5K1CO60331 668 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 GSTT2P0CG29 244 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 CHMP24386 653 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 CPZQ66K79 652 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 DTWD2Q8NBA8 298 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 ZDHHC5Q9C0B5 715 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 FZR1Q9UM11 496 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 LRP5O75197 1615 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 IL2RAP01589 272 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 DEFA4P12838 97 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 ETV4P43268 484 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 TRMT12Q53H54 448 aaKnown RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 PXKQ7Z7A4 578 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 EXD3Q8N9H8 876 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 SYT4Q9H2B2 425 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 CASC3O15234 703 aaKnown RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 TACR1P25103 407 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 MS4A2Q01362 244 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 OR1S1Q8NH92 325 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 DCAF13Q9NV06 445 aaKnown RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 PARP14Q460N5 1801 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 ARHGAP33O14559 1287 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 BCAS1O75363 584 aaPredicted RBP13.31□□□□□ -0.28
TRIO-222ENST00000515144 PKLRP30613 574 aa13.31□□□□□ -0.28
TRIO-222ENST00000515144 AGBL4Q5VU57 503 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms