RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CRIM1Q9NZV1 1036 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 SEC14L4Q9UDX3 406 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 MAGEL2Q9UJ55 1249 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 FLVCR1Q9Y5Y0 555 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 CELSR2Q9HCU4 2923 aa12.38□□□□□ -0.43
USP46-209ENST00000514536 LRRN3E7EW58 273 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 J3KTA2 159 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 M0R082 166 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 KPNA4O00629 521 aaPredicted RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 ARPC2O15144 300 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 MRPL33O75394 65 aaKnown RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 BGLAPP02818 100 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 PRF1P14222 555 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 OR3A2P47893 321 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 SPATS1Q496A3 300 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 H1FNTQ75WM6 255 aaPredicted RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 OR6S1Q8NH40 331 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 ZNF587Q96SQ5 575 aaPredicted RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 RHCGQ9UBD6 479 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 KCNN3Q9UGI6 736 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 SAMD4AQ9UPU9 718 aaKnown RBP12.37□□□□□ -0.43
USP46-209ENST00000514536 RASD1Q9Y272 281 aa12.37□□□□□ -0.43
USP46-209ENST00000514536 CRYBG3Q68DQ2 2970 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 VAMP5O95183 116 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 CH25HO95992 272 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 IFNA8P32881 189 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 UGT2B10P36537 528 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 PCYT1AP49585 367 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 MFSD13AQ14CX5 517 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 ARHGAP24Q8N264 748 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 ZIC4Q8N9L1 334 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 PRRC1Q96M27 445 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 NSMCE2Q96MF7 247 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
USP46-209ENST00000514536 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 FNDC11Q9BVV2 318 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 ASPNQ9BXN1 380 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 C1orf21Q9H246 121 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 V9GYQ6 96 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 CENPEQ02224 2701 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 CACNA1DQ01668 2161 aa12.36□□□□□ -0.43
USP46-209ENST00000514536 FFAR1O14842 300 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 FZD7O75084 574 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 PDE5AO76074 875 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 ADAP00813 363 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 IGHV3-9P01782 118 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 THRBP10828 461 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 FUT4P22083 530 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 PMS2P3Q13401 168 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 STAC2Q6ZMT1 411 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CREB3L2Q70SY1 520 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 AAED1Q7RTV5 226 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 TSEN54Q7Z6J9 526 aaKnown RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 CXorf67Q86X51 503 aaPredicted RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 GABRG1Q8N1C3 465 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 UBE2J2Q8N2K1 259 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 FAM222BQ8WU58 562 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 APH1AQ96BI3 265 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 PYURFQ96I23 114 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 SLC19A3Q9BZV2 496 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 MEPEQ9NQ76 525 aaPredicted RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 PARPBPQ9NWS1 579 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 NDRG3Q9UGV2 375 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 B3GALT5Q9Y2C3 310 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CORINQ9Y5Q5 1042 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 SH3D21A4FU49 640 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 MS4A18H0YCH9 400 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 MT-ATP6P00846 226 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 EPXP11678 715 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CCKARP32238 428 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 RBM34P42696 430 aaKnown RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 UGT2B15P54855 530 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 IL1RL1Q01638 556 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
USP46-209ENST00000514536 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 ZNF74Q16587 644 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 MS4A18Q3C1V0 323 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 CYP2R1Q6VVX0 501 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 LRRC17Q8N6Y2 441 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
USP46-209ENST00000514536 TMEM239Q8WW34 195 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms