RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 ATP1B3P54709 279 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 PRRX1P54821 245 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 SH3BGRP55822 239 aaPredicted RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 LMO4P61968 165 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 TPM4P67936 248 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 MS4A2Q01362 244 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 BST2Q10589 180 aaKnown RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 STK38Q15208 465 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 PRAMEF20Q5VT98 475 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 OR2A2Q6IF42 318 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 FAM173BQ6P4H8 233 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 FAM199XQ6PEV8 388 aaPredicted RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 DHDDSQ86SQ9 333 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 SLC47A2Q86VL8 602 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 C9orf40Q8IXQ3 194 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 SVOPLQ8N434 492 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 C17orf47Q8NEP4 570 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 OR2T33Q8NG76 320 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 OR6T1Q8NGN1 323 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 OR1L4Q8NGR5 311 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 FAM222BQ8WU58 562 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 HTR3CQ8WXA8 447 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 C18orf12Q96KH6 178 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 ATOH8Q96SQ7 321 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 MCHR1Q99705 422 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 LLPHQ9BRT6 129 aaKnown RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 DPH7Q9BTV6 452 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 NUP58Q9BVL2 599 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 ZSCAN16Q9H4T2 348 aaPredicted RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 AZI2Q9H6S1 392 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 EXO5Q9H790 373 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 NIPAL2Q9H841 368 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 NHEJ1Q9H9Q4 299 aaPredicted RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 POLE4Q9NR33 117 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 B3GNT2Q9NY97 397 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 ZNF581Q9P0T4 197 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 DPM3Q9P2X0 92 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 PRODH2Q9UF12 536 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 WARS2Q9UGM6 360 aaKnown RBP2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 SLC2A6Q9UGQ3 507 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 PHF11Q9UIL8 331 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 PEX16Q9Y5Y5 336 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 ABCC6O95255 1503 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 ZNF609O15014 1411 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 MROH5Q6ZUA9 1318 aa2.67□□□□□ -1.98
CALCOCO2-223ENST00000514267 LAMB4A4D0S4 1761 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 MRC1P22897 1456 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 TUBGCP6Q96RT7 1819 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 PALLDQ8WX93 1383 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 PKD1L3Q7Z443 1732 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 A0A1B0GWB2 263 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 FRG2CA6NGY1 282 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 TMEM110-MUSTN1A8MSY1 372 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ERVV-1B6SEH8 477 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 TRDCB7Z8K6 153 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 E9PAM4 449 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 H0YIV9 168 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 BOLA2-SMG1P6H3BVE0 249 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 SULT2B1O00204 365 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 HAS3O00219 553 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 GPAA1O43292 621 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 HCN1O60741 890 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 GALR3O60755 368 aaPredicted RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 SCRG1O75711 98 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 LYPD3O95274 346 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 PIGRP01833 764 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 LGALS2P05162 132 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 NCK1P16333 377 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 FGF9P31371 208 aaPredicted RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 CCR1P32246 355 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 XCR1P46094 333 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 DAP3P51398 398 aaKnown RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 HMGCS2P54868 508 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 MRPS11P82912 194 aaKnown RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 OC90Q02509 493 aaPredicted RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ASPHQ12797 758 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 IFT88Q13099 833 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 SLC10A1Q14973 349 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 PPP1R7Q15435 360 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 CARD17Q5XLA6 110 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 LEMD1Q68G75 181 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ATL3Q6DD88 541 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 UFSP1Q6NVU6 142 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 CCDC137Q6PK04 289 aaKnown RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 MCOLN2Q8IZK6 566 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ALLCQ8N6M5 410 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 SPATA4Q8NEY3 305 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 OR4C5Q8NGB2 326 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 KCNG3Q8TAE7 436 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 MAGEE2Q8TD90 523 aaPredicted RBP2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 ST8SIA1Q92185 356 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 TOMM40LQ969M1 308 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 FAF2Q96CS3 445 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 NUS1Q96E22 293 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 C8orf76Q96K31 380 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 IFT74Q96LB3 600 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 IL4I1Q96RQ9 567 aa2.66□□□□□ -1.98
CALCOCO2-223ENST00000514267 CLCC1Q96S66 551 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms