RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 C9orf135Q5VTT2 229 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 SLC48A1Q6P1K1 146 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 Q6ZT83 130 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 LRRC70Q7Z2Q7 622 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 GALNT7Q86SF2 657 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 ZC3HC1Q86WB0 502 aaKnown RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 NUDT13Q86X67 352 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 CCDC170Q8IYT3 715 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 ZNF433Q8N7K0 673 aaPredicted RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 GBP7Q8N8V2 638 aaPredicted RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 WDR31Q8NA23 367 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 OR7G2Q8NG99 324 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 ZNF418Q8TF45 676 aaPredicted RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 ZNF75CPQ92670 426 aaPredicted RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 KLHL15Q96M94 604 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 LRRC1Q9BTT6 524 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 TRMOQ9BU70 441 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 MRPL1Q9BYD6 325 aaKnown RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 NUAK2Q9H093 628 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 XAB2Q9HCS7 855 aaKnown RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 PPANQ9NQ55 473 aaKnown RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 MED17Q9NVC6 651 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 PDP1Q9P0J1 537 aaPredicted RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 PRODH2Q9UF12 536 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 ZDHHC2Q9UIJ5 367 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 WBP11Q9Y2W2 641 aaKnown RBP4.13□□□□□ -1.75
HTT-211ENST00000513326 RNF11Q9Y3C5 154 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 SNX8Q9Y5X2 465 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 PTGDR2Q9Y5Y4 395 aa4.13□□□□□ -1.75
HTT-211ENST00000513326 WNK2Q9Y3S1 2297 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ARHGAP32A7KAX9 2087 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 IGLV3-32A0A0A0MS00 114 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 LOC100653049A0A140TA62 436 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 UBXN8O00124 270 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 PROP1O75360 226 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 KRT34O76011 436 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 PDE5AO76074 875 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 UTS2O95399 124 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 TTC4O95801 387 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ANGPTL1O95841 491 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FGGP02679 453 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ENO1P06733 434 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 TPM1P09493 284 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CSF1P09603 554 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 DAOP14920 347 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CSNK2A2P19784 350 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 MDKP21741 143 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 PNLIPRP2P54317 469 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 KRTAP10-3P60369 221 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ZNF155Q12901 538 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 FOXF1Q12946 379 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CSTF3Q12996 717 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 HIST2H2ACQ16777 129 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 SPANXN3Q5MJ09 141 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 TIMM23BQ5SRD1 257 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 RNASEH2BQ5TBB1 312 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 C6orf163Q5TEZ5 329 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ARMC3Q5W041 872 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ATG16L1Q676U5 607 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 HIST2H2AA3Q6FI13 130 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 SULT1C3Q6IMI6 304 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ZNF544Q6NX49 715 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 USP43Q70EL4 1123 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FCRLAQ7L513 359 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 SLC46A3Q7Z3Q1 461 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 SPATA19Q7Z5L4 167 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 GLCCI1Q86VQ1 547 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 GTPBP8Q8N3Z3 284 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 TEX9Q8N6V9 391 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 SLC16A11Q8NCK7 471 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CLDND2Q8NHS1 167 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 WDR20Q8TBZ3 569 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FAM110BQ8TC76 370 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ANKRD7Q92527 254 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 TMEM186Q96B77 213 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 TM4SF18Q96CE8 201 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 KLHL29Q96CT2 875 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 MUCL1Q96DR8 90 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 ZNF764Q96H86 408 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 SH3YL1Q96HL8 342 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 MPP4Q96JB8 637 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 RADILQ96JH8 1075 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 RITA1Q96K30 269 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 GPR78Q96P69 363 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 PSD2Q9BQI7 771 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CAPS2Q9BXY5 557 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 DERL2Q9GZP9 239 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CDC42EP4Q9H3Q1 356 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 ALG9Q9H6U8 611 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 WDR41Q9HAD4 459 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 GLRX2Q9NS18 164 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FARSBQ9NSD9 589 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 ACSS1Q9NUB1 689 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 FAM120CQ9NX05 1096 aaKnown RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 TREM2Q9NZC2 230 aa4.12□□□□□ -1.75
HTT-211ENST00000513326 CORO1CQ9ULV4 474 aaPredicted RBP4.12□□□□□ -1.75
HTT-211ENST00000513326 ICAM5Q9UMF0 924 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms