RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 KHDC1Q4VXA5 237 aaKnown RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 ZNF322Q6U7Q0 402 aaPredicted RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 TMEM64Q6YI46 380 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 Q6ZNB5 142 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PIWIL3Q7Z3Z3 882 aaKnown RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 TMEM200AQ86VY9 491 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 VRK2Q86Y07 508 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PTOV1Q86YD1 416 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 OR2V1Q8NHB1 315 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 GRPEL2Q8TAA5 225 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 CPNE4Q96A23 557 aaPredicted RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 MRGPRX4Q96LA9 322 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 ATOH8Q96SQ7 321 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 ALG8Q9BVK2 526 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 SHARPINQ9H0F6 387 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 MMP27Q9H306 513 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 CHD4Q14839 1912 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 CEBPZOSA8MTT3 80 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 CLIC3O95833 236 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 UBBP0CG47 229 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 UBCP0CG48 685 aaKnown RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 NDUFB7P17568 137 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 AQP4P55087 323 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 MTCP1P56278 107 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 RAC1P63000 192 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 TSPAN31Q12999 210 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 MAB21L1Q13394 359 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 IKZF1Q13422 519 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PIN1Q13526 163 aaPredicted RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 MOGSQ13724 837 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 OR1C1Q15619 314 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PIP5KL1Q5T9C9 394 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 FCRL6Q6DN72 434 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 OR7E24Q6IFN5 339 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 DPY19L2P2Q6ZN68 376 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 GDPGP1Q6ZNW5 385 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 IGFN1Q86VF2 1251 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 OR13J1Q8NGT2 312 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 TM4SF18Q96CE8 201 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 CSF3RQ99062 836 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 MGLLQ99685 303 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 INPP5KQ9BT40 448 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 UNKLQ9H9P5 680 aaKnown RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 P4HTMQ9NXG6 502 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 ANKRD10Q9NXR5 420 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 DAPP1Q9UN19 280 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 SLC17A4Q9Y2C5 497 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 HDGFL3Q9Y3E1 203 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 RGPD5Q99666 1765 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 GPR39O43194 453 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 MED6O75586 246 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 IGLV3-27P01718 113 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 AKR1C4P17516 323 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 ATF4P18848 351 aaPredicted RBP3.93□□□□□ -1.78
VCAN-209ENST00000513016 MAGEA12P43365 314 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 EDDM3BP56851 147 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PPP2CBP62714 309 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PPP2CAP67775 309 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 STPG1Q5TH74 334 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 FCRLBQ6BAA4 426 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 WDR88Q6ZMY6 472 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 PGBD5Q8N414 524 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 POC1BQ8TC44 478 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 FGF11Q92914 225 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 NT5C3BQ969T7 300 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 SLC35A4Q96G79 324 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 RAB1BQ9H0U4 201 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 HSD3B7Q9H2F3 369 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 SEMA4GQ9NTN9 838 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 SSUH2Q9Y2M2 353 aa3.93□□□□□ -1.78
VCAN-209ENST00000513016 LAMB4A4D0S4 1761 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ALS2Q96Q42 1657 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 SCN11AQ9UI33 1791 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 TRAV18A0A075B6X5 111 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 SERPINA7P05543 415 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 CD53P19397 219 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 CRHBPP24387 322 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 DSCR4P56555 118 aaPredicted RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 ZNF45Q02386 682 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 SLC14A1Q13336 389 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 AGBL4Q5VU57 503 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 MARCH3Q86UD3 253 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 BRIX1Q8TDN6 353 aaKnown RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 DUSP15Q9H1R2 295 aaPredicted RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 CLMPQ9H6B4 373 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 SIDT1Q9NXL6 827 aaKnown RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 KCNG2Q9UJ96 466 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 BTAF1O14981 1849 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 NAP1L6A6NFF2 107 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 K7EQS6 105 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 CNIH1O95406 144 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ST6GAL1P15907 406 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 NAGAP17050 411 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 MAOAP21397 527 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 FUT4P22083 530 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 LSSP48449 732 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 TAS2R46P59540 309 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 FXYD4P59646 89 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms