RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZNF432O94892 652 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 TGFAP01135 160 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 GPIP06744 558 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 ETFAP13804 333 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 ZNF23P17027 643 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 THBS4P35443 961 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 HOXC5Q00444 222 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 TGFBR3Q03167 851 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 EFNB3Q15768 340 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 PHYHD1Q5SRE7 291 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 OGFOD2Q6N063 350 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 ZNF621Q6ZSS3 439 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 COMTD1Q86VU5 262 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 POMGNT2Q8NAT1 580 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 PIMREGQ9BSJ6 248 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 TMEM109Q9BVC6 243 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 WDR55Q9H6Y2 383 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-202ENST00000509637 TMEM45AQ9NWC5 275 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 B3GAT1Q9P2W7 334 aa13.79□□□□□ -0.2
RAB40C-202ENST00000509637 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-202ENST00000509637 ARPC4-TTLL3A0A0A6YYG9 625 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 LOC390937A0A1W2PQ73 354 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 NDUFS8O00217 210 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 WNT11O96014 354 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 C8BP07358 591 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 TFPTP0C1Z6 253 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 NR2F1P10589 423 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 IL7RP16871 459 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 ARF1P84077 181 aaKnown RBP13.78□□□□□ -0.2
RAB40C-202ENST00000509637 TRIP10Q15642 601 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 GSTA3Q16772 222 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 NIPAL3Q6P499 406 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 SERPINA11Q86U17 422 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 CARM1Q86X55 608 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 CADM2Q8N3J6 435 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.78□□□□□ -0.27e-7■■■■■ 86.8
RAB40C-202ENST00000509637 PANX1Q96RD7 426 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 NOX3Q9HBY0 568 aa13.78□□□□□ -0.2
RAB40C-202ENST00000509637 B9A039 149 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 FZD7O75084 574 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 PGRP06401 933 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 DBIP07108 87 aaKnown RBP13.77□□□□□ -0.21
RAB40C-202ENST00000509637 NUDT7P0C024 238 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 CXCR1P25024 350 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 GIFP27352 417 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 BST1Q10588 318 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 TNFAIP8L3Q5GJ75 292 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 C1orf140Q5VVS0 124 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 TMEM225Q6GV28 225 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 NHLRC1Q6VVB1 395 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-202ENST00000509637 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 VPS33AQ96AX1 596 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF75AQ96N20 296 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 PIF1Q9H611 641 aa13.77□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF443Q9Y2A4 671 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-202ENST00000509637 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 A8MVM7 634 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 BIRC5O15392 142 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 SEC14L2O76054 403 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 TACSTD2P09758 323 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 PNMTP11086 282 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-202ENST00000509637 MAP2K6P52564 334 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
RAB40C-202ENST00000509637 SNRPD2P62316 118 aaKnown RBP13.76□□□□□ -0.21
RAB40C-202ENST00000509637 HPCAP84074 193 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 ROR2Q01974 943 aaKnown RBP13.76□□□□□ -0.21
RAB40C-202ENST00000509637 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 IQCCQ4KMZ1 466 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 CDK20Q8IZL9 346 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 LINC00470Q9BZP3 86 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 OBP2BQ9NPH6 170 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 FKBP7Q9Y680 259 aa13.76□□□□□ -0.21
RAB40C-202ENST00000509637 IGKV1D-42A0A075B6H8 117 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF587BE7ETH6 402 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 WNT9BO14905 357 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 PDE5AO76074 875 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 CRYAAP02489 173 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 BCHEP06276 602 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 BMP4P12644 408 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 CBR1P16152 277 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 EPHA3P29320 983 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 PPOXP50336 477 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 CLDN17P56750 224 aa13.75□□□□□ -0.21
RAB40C-202ENST00000509637 WDR4P57081 412 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms