RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 ELK3P41970 407 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 VBP1P61758 197 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 DGCR6Q14129 220 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PPP1R3AQ16821 1122 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SBK1Q52WX2 424 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 XKR4Q5GH76 650 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 WLSQ5T9L3 541 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 LIPNQ5VXI9 398 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 WDR25Q64LD2 544 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TMEM53Q6P2H8 277 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SASS6Q6UVJ0 657 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 FRRS1Q6ZNA5 592 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 LRRC74BQ6ZQY2 392 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 Q71RC1 249 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 EIF3MQ7L2H7 374 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 C16orf82Q7Z2V1 217 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TIPARPQ7Z3E1 657 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 KIAA1328Q86T90 577 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 KCNMB4Q86W47 210 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PELI3Q8N2H9 469 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RFLNBQ8N5W9 214 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 POC1AQ8NBT0 407 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OR1E3Q8WZA6 343 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TADA1Q96BN2 335 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SERAC1Q96JX3 654 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 C9orf85Q96MD7 179 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SLC38A2Q96QD8 506 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CGREF1Q99674 301 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RACGAP1Q9H0H5 632 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 DEFB129Q9H1M3 183 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 WDR13Q9H1Z4 485 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 C6orf106Q9H6K1 298 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NT5DC2Q9H857 520 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NHEJ1Q9H9Q4 299 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ELL3Q9HB65 397 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF334Q9HCZ1 680 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 DMAP1Q9NPF5 467 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 EXOSC3Q9NQT5 275 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 STX18Q9P2W9 335 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PISDQ9UG56 409 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TRMT112Q9UI30 125 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NUP50Q9UKX7 468 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SAR1BQ9Y6B6 198 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 DOCK1Q14185 1865 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SPTBN5Q9NRC6 3674 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 MYH13Q9UKX3 1938 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 IGHV3-20A0A0C4DH32 117 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PP2D1A8MPX8 630 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CENPBD1B2RD01 187 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SMIM1B2RUZ4 78 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 H3BMH7 237 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 FGF17O60258 216 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CDC123O75794 336 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CABYRO75952 493 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NXPH4O95158 308 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TMEM50AO95807 157 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OAS1P00973 400 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SP1P08047 785 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 IGFBP1P08833 259 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CCL5P13501 91 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 XRCC1P18887 633 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 KITLGP21583 273 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 IFNA8P32881 189 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 YAP1P46937 504 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CCNHP51946 323 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ARHGDIBP52566 201 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 XGP55808 180 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RAB11AP62491 216 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PAX5Q02548 391 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RGS1Q08116 209 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 LAGE3Q14657 143 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 RAB11BQ15907 218 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CYP51A1Q16850 503 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PGGHGQ32M88 737 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 HNRNPA1L2Q32P51 320 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF672Q499Z4 452 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 VPS26BQ4G0F5 336 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 WDR38Q5JTN6 314 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PDZK1Q5T2W1 519 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF658Q5TYW1 1059 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 FKBP1CQ5VVH2 108 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SLX4IPQ5VYV7 408 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 C9orf57Q5W0N0 161 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 STUMQ69YW2 141 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PVRIGQ6DKI7 326 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OR8G2PQ6IF36 304 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF425Q6IV72 752 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 NEPROQ6NW34 567 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 TPRA1Q86W33 373 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 STX12Q86Y82 276 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OFCC1Q8IZS5 231 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 BPIFB2Q8N4F0 458 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 CSGALNACT2Q8N6G5 542 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF565Q8N9K5 539 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OR2L3Q8NG85 312 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 OR13A1Q8NGR1 328 aa1.88□□□□□ -2.11
PDE4D-218ENST00000509368 SMAP2Q8WU79 429 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PDCD6IPQ8WUM4 868 aaKnown RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF300Q96RE9 604 aaPredicted RBP1.88□□□□□ -2.11
PDE4D-218ENST00000509368 PSD2Q9BQI7 771 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms