RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MICU2Q8IYU8 434 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 EID3Q8N140 333 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 GABRG1Q8N1C3 465 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 RNF148Q8N7C7 305 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM99Q8N816 258 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CNEP1R1Q8N9A8 125 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF610Q8N9Z0 462 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 OR6K3Q8NGY3 331 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 LINC01560Q8TB33 94 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC25A43Q8WUT9 341 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PMM1Q92871 262 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC35B4Q969S0 331 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CPNE4Q96A23 557 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 GMPPAQ96IJ6 420 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ZFP3Q96NJ6 502 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF385AQ96PM9 386 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 RBM24Q9BX46 236 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 PCDHAC1Q9H158 963 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 KCNJ16Q9NPI9 418 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 THUMPD1Q9NXG2 353 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM181Q9P2C4 612 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 TESQ9UGI8 421 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CORO2BQ9UQ03 480 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 ARL2BPQ9Y2Y0 163 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SNX13Q9Y5W8 968 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CACNA1DQ01668 2161 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 AKAP6Q13023 2319 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 CCDC168Q8NDH2 2452 aa6.38□□□□□ -1.39
TOPBP1-207ENST00000509162 SPG11Q96JI7 2443 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 TRBV23-1A0A0A0MS06 115 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 TRAV20A0A0B4J274 112 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 AQP7P3A6NL99 342 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CPSF4LA6NMK7 179 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 DEFB108AA8MXU0 73 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 J3KTA2 159 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 PDLIM1O00151 329 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FFAR1O14842 300 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 HNRNPRO43390 633 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 TRAF3IP2O43734 574 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CCDC22O60826 627 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 AKR7A3O95154 331 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FAM107AO95990 144 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CRHP06850 196 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 PNMTP11086 282 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FCGR2AP12318 317 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 COX6B1P14854 86 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 GGT1P19440 569 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FUT1P19526 365 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 COX5AP20674 150 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FPR1P21462 350 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 ME2P23368 584 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC7A1P30825 629 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 MSX2P35548 267 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 OR1E2P47887 323 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CARD18P57730 90 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 RPS3AP61247 264 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 SORDQ00796 357 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CEACAM7Q14002 265 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 VEZF1Q14119 521 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 LARS2Q15031 903 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 OR1Q1Q15612 314 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 OR7A5Q15622 319 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 LRRC23Q53EV4 343 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CYBRD1Q53TN4 286 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 C1orf140Q5VVS0 124 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 STAC2Q6ZMT1 411 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CARM1Q86X55 608 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 MEX3DQ86XN8 651 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 NKAIN4Q8IVV8 208 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF440Q8IYI8 595 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 ANKS4BQ8N8V4 417 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 OR2T12Q8NG77 320 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM234Q8WY98 164 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 TAAR8Q969N4 342 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 NSRP1Q9H0G5 558 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 NELFAQ9H3P2 528 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 MEPEQ9NQ76 525 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 CD300AQ9UGN4 299 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 A4GNTQ9UNA3 340 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 IFT52Q9Y366 437 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 HDGFL3Q9Y3E1 203 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 FLVCR1Q9Y5Y0 555 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 MYO9AB2RTY4 2548 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 ABCA4P78363 2273 aa6.37□□□□□ -1.39
TOPBP1-207ENST00000509162 ANKRD17O75179 2603 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 A0A087WUJ7 227 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SULT2B1O00204 365 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 CXCR6O00574 342 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 SHOXO15266 292 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 FMO6PO60774 539 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 NPPAP01160 153 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 IGHV3-9P01782 118 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 HRGP04196 525 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 ITGA5P08648 1049 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 TFPIP10646 304 aa6.36□□□□□ -1.39
TOPBP1-207ENST00000509162 HLA-DOBP13765 273 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms