RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 OR6C65A6NJZ3 312 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 RIIAD1A6NNX1 92 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 CENPBD1B2RD01 187 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 GPR171O14626 319 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ARPC3O15145 178 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 DENRO43583 198 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 FAM87AP0C7U9 286 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ZNF708P17019 499 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ENPP1P22413 925 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 GRK5P34947 590 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 SFTPDP35247 375 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 GIPRP48546 466 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 CENPAP49450 140 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 AGFG1P52594 562 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 AQP4P55087 323 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 OR2B6P58173 313 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 PDK3Q15120 406 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 RNPS1Q15287 305 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 OR7A5Q15622 319 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 SLC36A3Q495N2 470 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ALG10Q5BKT4 473 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 EEF1A1P5Q5VTE0 462 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 MEDAGQ5VYS4 303 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 TMEM225Q6GV28 225 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 GALNT5Q7Z7M9 940 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ADCK1Q86TW2 530 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 HS3ST5Q8IZT8 346 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 RFKQ969G6 155 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 SLC25A36Q96CQ1 311 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 PITX2Q99697 317 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 C20orf141Q9NUB4 165 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 NDRG4Q9ULP0 352 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 LRCH1Q9Y2L9 728 aa12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 TNRC6AQ8NDV7 1962 aaKnown RBP12.97□□□□□ -0.33
HMGCLL1-208ENST00000508459 AQP7P3A6NL99 342 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 FIGNL2A6NMB9 653 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ZAR1LA6NP61 321 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 AHRRA9YTQ3 701 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 BLOC1S5-TXNDC5H3BN57 136 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 EIF1AYO14602 144 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 XKRYO14609 159 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 PTP4A3O75365 173 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 SNAP29O95721 258 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 CD14P08571 375 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 TSPAN19P0C672 248 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ADORA3P0DMS8 318 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ZNF3P17036 446 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 MAKP20794 623 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 POU1F1P28069 291 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 GRPRP30550 384 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 UQCRC1P31930 480 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 PTGES3Q15185 160 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 POU4F3Q15319 338 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 PLEKHN1Q494U1 663 aaPredicted RBP12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 LNX2Q8N448 690 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 EXD3Q8N9H8 876 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 GPR137Q96N19 417 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 ZNF570Q96NI8 536 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 OXGR1Q96P68 337 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 IFT27Q9BW83 186 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 TSSK6Q9BXA6 273 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 FN3KQ9H479 309 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 INIPQ9NRY2 104 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 KLHL9Q9P2J3 617 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 GRHPRQ9UBQ7 328 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 REV1Q9UBZ9 1251 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 LHX6Q9UPM6 363 aa12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 MAGED1Q9Y5V3 778 aaPredicted RBP12.96□□□□□ -0.33
HMGCLL1-208ENST00000508459 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 PLPP3O14495 311 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 CDC42EP2O14613 210 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 RNF13O43567 381 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 WDR1O75083 606 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 ZNF43P17038 809 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 GGT2P36268 569 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 CD97P48960 835 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 LHX2P50458 406 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 BLVRAP53004 296 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 CDK5Q00535 292 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 C1DQ13901 141 aaKnown RBP12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 SLX4IPQ5VYV7 408 aa12.95□□□□□ -0.34
HMGCLL1-208ENST00000508459 OR2A2Q6IF42 318 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms