RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FBN3Q75N90 2809 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 FTCDNL1E5RQL4 147 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 H7C417 338 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 CLIC1O00299 241 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 FZD7O75084 574 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 VAMP5O95183 116 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 SELENOPP49908 381 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 HOXC5Q00444 222 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 EGR4Q05215 589 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 HIKESHIQ53FT3 197 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF311Q5JNZ3 666 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 CREB3L2Q70SY1 520 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 LINGO2Q7L985 606 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 EPHX4Q8IUS5 362 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 OR10H5Q8NGA6 315 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 BBS10Q8TAM1 723 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 STK35Q8TDR2 534 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 HTRA1Q92743 480 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 SLC35B4Q969S0 331 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 C7orf26Q96N11 449 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 TAPBPLQ9BX59 468 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 ARMC7Q9H6L4 198 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 SLC25A37Q9NYZ2 338 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 IFT52Q9Y366 437 aa11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 TLX2O43763 284 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 TP53P04637 393 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 PNMTP11086 282 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 ETS2P15036 469 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 CDH2P19022 906 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 FABP6P51161 128 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 PRPS1P60891 318 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 LRIF1Q5T3J3 769 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 TMEM225Q6GV28 225 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 KLHL24Q6TFL4 600 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 C6orf89Q6UWU4 347 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 COMTD1Q86VU5 262 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 C10orf111Q8N326 155 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF525Q8N782 197 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 NELFAQ9H3P2 528 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 RAD21L1Q9H4I0 556 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 FKRPQ9H9S5 495 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 CACYBPQ9HB71 228 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 SLCO1B3Q9NPD5 702 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 TCF7L2Q9NQB0 619 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 SLAMF8Q9P0V8 285 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF232Q9UNY5 417 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 RASD1Q9Y272 281 aa11.36□□□□□ -0.59
HMGCS1-205ENST00000508319 IGHV1-18A0A0C4DH31 117 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ELOA3DA6NLF2 546 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF587BE7ETH6 402 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 GPRIN2O60269 458 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ERLIN1O75477 346 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 AHSA1O95433 338 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 LGI1O95970 557 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 WNT11O96014 354 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ARAFP10398 606 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 HTR2AP28223 471 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 STX1BP61266 288 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 RAB35Q15286 201 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ELOA3BQ3SY89 546 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 TBRG1Q3YBR2 411 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 NIPAL3Q6P499 406 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 BLOC1S3Q6QNY0 202 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 CLEC2AQ6UVW9 174 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ABHD12BQ7Z5M8 362 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 FUNDC1Q8IVP5 155 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ELOA3Q8NG57 546 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 OR1K1Q8NGR3 316 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 EBF4Q9BQW3 602 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 RHNO1Q9BSD3 238 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 SLC52A3Q9NQ40 469 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 B3GAT1Q9P2W7 334 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 SEC14L4Q9UDX3 406 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 ATP23Q9Y6H3 246 aa11.35□□□□□ -0.59
HMGCS1-205ENST00000508319 IGKV1D-42A0A075B6H8 117 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 TRBV5-3A0A0A0MS03 114 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 OR6C65A6NJZ3 312 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 C5orf58C9J3I9 102 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 NR5A2O00482 541 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 UPK3AO75631 287 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 KRT33AO76009 404 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF432O94892 652 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 TGDSO95455 350 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 PRKAR1BP31321 381 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 IDH3AP50213 366 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 DSCR9P59020 149 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 GCNT6Q5T4J0 391 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 AGBL2Q5U5Z8 902 aa11.34□□□□□ -0.59
HMGCS1-205ENST00000508319 KDM8Q8N371 416 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms