RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ANGPTL4Q9BY76 406 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 CCDC90BQ9GZT6 254 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 ANKRD19PQ9H560 264 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 DNAJB12Q9NXW2 375 aaKnown RBP9.97□□□□□ -0.81
PROM1-207ENST00000508167 SCN3BQ9NY72 215 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 FBXL2Q9UKC9 423 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 SNX5Q9Y5X3 404 aa9.97□□□□□ -0.81
PROM1-207ENST00000508167 A0A0G2JMM0 328 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 A0A1W2PPB8 328 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 A0A1W2PRS3 328 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 KIR3DP1A8MWS1 328 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 NPIPA5E9PKD4 350 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 BCL10O95999 233 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 SFTPDP35247 375 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 FAM180AQ6UWF9 173 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 DCDC5Q6ZRR9 648 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 SNX29P2Q8IUI4 249 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 NANOGP1Q8N7R0 232 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 SMAD5Q99717 465 aaKnown RBP9.96□□□□□ -0.81
PROM1-207ENST00000508167 PALMDQ9NP74 551 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 NPIPA1Q9UND3 350 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 ERGIC3Q9Y282 383 aa9.96□□□□□ -0.81
PROM1-207ENST00000508167 TRAPPC13A5PLN9 417 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 NGFRP08138 427 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 TACR3P29371 465 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 TPD52P55327 224 aaPredicted RBP9.96□□□□□ -0.82
PROM1-207ENST00000508167 SRYQ05066 204 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 LY6DQ14210 128 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 TIGD6Q17RP2 521 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 ZNF362Q5T0B9 420 aaPredicted RBP9.96□□□□□ -0.82
PROM1-207ENST00000508167 WBP2NLQ6ICG8 309 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 DEPDC4Q8N2C3 294 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SVOPQ8N4V2 548 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 OR52I1Q8NGK6 324 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SLC41A3Q96GZ6 507 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 RTN4RQ9BZR6 473 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SLC7A7Q9UM01 511 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SHISA8B8ZZ34 492 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 LRRTM2O43300 516 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SLC10A1Q14973 349 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 AADACL4Q5VUY2 407 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 ARSKQ6UWY0 536 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 P3H2Q8IVL5 708 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 KISS1RQ969F8 398 aaPredicted RBP9.96□□□□□ -0.82
PROM1-207ENST00000508167 BORCS5Q969J3 196 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 SLC25A36Q96CQ1 311 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 RNF32Q9H0A6 362 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 IL20Q9NYY1 176 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 DNAJC27Q9NZQ0 273 aa9.96□□□□□ -0.82
PROM1-207ENST00000508167 MED12Q93074 2177 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 A0A1B0GWA3 101 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 GIPRP48546 466 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 ETV1P50549 477 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 KRCC1Q9NPI7 259 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 DEPPQ9NTK1 212 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 C20orf141Q9NUB4 165 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.95□□□□□ -0.82
PROM1-207ENST00000508167 SURF4O15260 269 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 NME2P1O60361 137 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 SCG5P05408 212 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 NME2P22392 152 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 PSMB9P28065 219 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 ETV6P41212 452 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 COX10Q12887 443 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 TRAM2Q15035 370 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 TOMM34Q15785 309 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 SGCBQ16585 318 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 WIPI1Q5MNZ9 446 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 ULK3Q6PHR2 472 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 DNAJA4Q8WW22 397 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 FAIMQ9NVQ4 179 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 K7EM74 188 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 ADAM10O14672 748 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 SNPHO15079 494 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 FUT1P19526 365 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 MAGEA5P43359 124 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 TSPAN31Q12999 210 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 SKP2Q13309 424 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 RASSF6Q6ZTQ3 369 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 CISD2Q8N5K1 135 aaKnown RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 MYDGFQ969H8 173 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 DCLRE1CQ96SD1 692 aaKnown RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 TTTY12Q9BZ98 90 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 MED17Q9NVC6 651 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 SPIN1Q9Y657 262 aaPredicted RBP9.95□□□□□ -0.82
PROM1-207ENST00000508167 FRYQ5TBA9 3013 aa9.95□□□□□ -0.82
PROM1-207ENST00000508167 ANKUB1A6NFN9 424 aa9.94□□□□□ -0.82
PROM1-207ENST00000508167 SERPINI2O75830 405 aa9.94□□□□□ -0.82
PROM1-207ENST00000508167 SAGP10523 405 aaPredicted RBP9.94□□□□□ -0.82
PROM1-207ENST00000508167 SFTPCP11686 197 aa9.94□□□□□ -0.82
PROM1-207ENST00000508167 FPR3P25089 353 aa9.94□□□□□ -0.82
PROM1-207ENST00000508167 CD97P48960 835 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms