RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 LINC01387J3KSC0 135 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 RGS10O43665 173 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 FADS1O60427 444 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ZIC3O60481 467 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 SOX30O94993 753 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 RCBTB2O95199 551 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 KCNH1O95259 989 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 IL33O95760 270 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 H2AFB1P0C5Y9 115 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 H2AFB2P0C5Z0 115 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 PRPS2P11908 318 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CYP4B1P13584 511 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 LBPP18428 481 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TACR1P25103 407 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CTSSP25774 331 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 RCVRNP35243 200 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OPRM1P35372 400 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 MSX2P35548 267 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 MAP3K8P41279 467 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 MC3RP41968 323 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 FRKP42685 505 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 SLC15A1P46059 708 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ASMTP46597 345 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GSK3BP49841 420 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ARHGDIAP52565 204 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GP2P55259 537 aaKnown RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 DLX5P56178 289 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 DSCR4P56555 118 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 KRTAP10-9P60411 292 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ISL1P61371 349 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 S100A12P80511 92 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 EMX2Q04743 252 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CD300CQ08708 224 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GAB1Q13480 694 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GPR50Q13585 617 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 PDE7AQ13946 482 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 RCAN2Q14206 197 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 MLC1Q15049 377 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 DECR1Q16698 335 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 SMU1Q2TAY7 513 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GLYR1Q49A26 553 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 VPS26BQ4G0F5 336 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 KANK2Q63ZY3 851 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 STEAP3Q658P3 488 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CLEC6AQ6EIG7 209 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ARSKQ6UWY0 536 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TMEM107Q6UX40 140 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ADGRE4PQ86SQ3 457 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TSPYL5Q86VY4 417 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 IFNEQ86WN2 208 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OFCC1Q8IZS5 231 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 STX19Q8N4C7 294 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 NATD1Q8N6N6 113 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 FAM156AQ8NDB6 213 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OR4N2Q8NGD1 307 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OR8J3Q8NGG0 315 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OR5K1Q8NHB7 308 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 OR14L1PQ8NHC6 308 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 GOT1L1Q8NHS2 421 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 LHFPL5Q8TAF8 219 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 DNAJA4Q8WW22 397 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ZBED6CLQ96FA7 236 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TM9SF2Q99805 663 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF559Q9BR84 538 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 KCNN2Q9H2S1 579 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TUBB1Q9H4B7 451 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 REEP4Q9H6H4 257 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 SERHLQ9NQF3 203 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ABCB10Q9NRK6 738 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 ACSS1Q9NUB1 689 aaPredicted RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 FAM120CQ9NX05 1096 aaKnown RBP7.25□□□□□ -1.25
SCN1A-207ENST00000507401 TAS2R10Q9NYW0 307 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CBLCQ9ULV8 474 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CAMK2AQ9UQM7 478 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
SCN1A-207ENST00000507401 POLQO75417 2590 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ANKRD17O75179 2603 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 FAM221AA4D161 298 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SERPINI2O75830 405 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 KCNK2O95069 426 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 NKX2-2O95096 273 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ANGPTL1O95841 491 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 LINC00032P0C843 101 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SDC1P18827 310 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 EFNA1P20827 205 aaPredicted RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 BMP5P22003 454 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 DPP4P27487 766 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 MAPK1P28482 360 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 NOS3P29474 1203 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 LCN1P31025 176 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 POLR2IP36954 125 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 TALDO1P37837 337 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 RPL3P39023 403 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 KIR2DL3P43628 341 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 LHX2P50458 406 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 ASCL1P50553 236 aa7.24□□□□□ -1.25
SCN1A-207ENST00000507401 MANFP55145 182 aaKnown RBP7.24□□□□□ -1.25
SCN1A-207ENST00000507401 SLC35A2P78381 396 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms