RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MGARPQ8TDB4 240 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 SLC25A43Q8WUT9 341 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 SSMEM1Q8WWF3 244 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 AMDHD1Q96NU7 426 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 ALKBH3Q96Q83 286 aaPredicted RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 TSPAN32Q96QS1 320 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 DIRC2Q96SL1 478 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 EBPLQ9BY08 206 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 CTPS2Q9NRF8 586 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 CPSF2Q9P2I0 782 aaKnown RBP6.07□□□□□ -1.44
VCAN-207ENST00000507162 OR5V1Q9UGF6 321 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 NFU1Q9UMS0 254 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 TRIM33Q9UPN9 1127 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 HDGFL3Q9Y3E1 203 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 POMT1Q9Y6A1 747 aa6.07□□□□□ -1.44
VCAN-207ENST00000507162 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 GOLGA6L22H0YM25 854 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 ZNF264O43296 627 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 EIF4E2O60573 245 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 EIF1BO60739 113 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 UPK3AO75631 287 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TGDSO95455 350 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 IGHV4-59P01825 116 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 SNRPBP14678 240 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 CHN1P15882 459 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 MAKP20794 623 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 MAP3K8P41279 467 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 SLC6A9P48067 706 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 GNB2P62879 340 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 SLC35A1P78382 337 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 RAE1P78406 368 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 H3F3AP84243 136 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 ROR2Q01974 943 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 PIGFQ07326 219 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 HNRNPA0Q13151 305 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
VCAN-207ENST00000507162 BTNL3Q6UXE8 466 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 LINGO2Q7L985 606 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 KLHL36Q8N4N3 616 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 OR4F6Q8NGB9 312 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 OR9K2Q8NGE7 335 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 ZNF563Q8TA94 476 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TMEM234Q8WY98 164 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TMEM45BQ96B21 275 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 UPRTQ96BW1 309 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 PHF21BQ96EK2 531 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 ELMOD3Q96FG2 381 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 NSUN5Q96P11 429 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 ZNF317Q96PQ6 595 aaPredicted RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 LAT2Q9GZY6 243 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 HOXD1Q9GZZ0 328 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 NELFAQ9H3P2 528 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 C16orf95Q9H693 158 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 DENND2DQ9H6A0 471 aaPredicted RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 SAP30LQ9HAJ7 183 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 BRF2Q9HAW0 419 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 PALMDQ9NP74 551 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 NPHS2Q9NP85 383 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 MIEF1Q9NQG6 463 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 NSMCE4AQ9NXX6 385 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 GRHL1Q9NZI5 618 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TMEM181Q9P2C4 612 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TXNDC16Q9P2K2 825 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 CHRNA9Q9UGM1 479 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 GRID1Q9ULK0 1009 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 SNX6Q9UNH7 406 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 FOXJ3Q9UPW0 622 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 POLR3KQ9Y2Y1 108 aaPredicted RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 DTNAQ9Y4J8 743 aa6.06□□□□□ -1.44
VCAN-207ENST00000507162 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 SPIN1Q9Y657 262 aaPredicted RBP6.06□□□□□ -1.44
VCAN-207ENST00000507162 ETV2O00321 342 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 DNPH1O43598 174 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 RSL1D1O76021 490 aaKnown RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 HSPA4LO95757 839 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 HLA-HP01893 362 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ANXA4P09525 319 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 PPIAL4GP0DN37 164 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 UROSP10746 265 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 UBL4AP11441 157 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ZNF35P13682 527 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 TSPAN8P19075 237 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 CD33P20138 364 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 DDCP20711 480 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 CXCR5P32302 372 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 RYKP34925 604 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 APOBEC1P41238 236 aaKnown RBP6.05□□□□□ -1.44
VCAN-207ENST00000507162 SELENOPP49908 381 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 MMP16P51512 607 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ATP12AP54707 1039 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 GLO1Q04760 184 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 SLC3A1Q07837 685 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ACSM2AQ08AH3 577 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 LCP2Q13094 533 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 TRAF3Q13114 568 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ESCO2Q56NI9 601 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 TTMPQ5BVD1 217 aa6.05□□□□□ -1.44
VCAN-207ENST00000507162 ZBTB37Q5TC79 503 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms