RNA–Protein interactions for RNA: ENST00000507075.1

ARRDC3-204, Transcript of arrestin domain containing 3, human

TSL 2

Gene ARRDC3, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARRDC3-204	ENST00000507075	LGALS2	P05162	132 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	HSP90AA1	P07900	732 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	NAMPT	P43490	491 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ESRRG	P62508	458 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ADARB1	P78563	741 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CDC20	Q12834	499 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ERCC8	Q13216	396 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	GUCA2B	Q16661	112 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TRIM16L	Q309B1	348 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	HCP5	Q6MZN7	132 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TAF8	Q7Z7C8	310 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TRIM69	Q86WT6	500 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	IQCA1	Q86XH1	822 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ZNF679	Q8IYX0	411 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	OR2G3	Q8NGZ4	309 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	EXOC6	Q8TAG9	804 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	DQX1	Q8TE96	717 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	SEC22A	Q96IW7	307 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	AKR1E2	Q96JD6	320 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	VSTM2L	Q96N03	204 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ZNF382	Q96SR6	550 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	RNF5	Q99942	180 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	SLC35A5	Q9BS91	424 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ZCCHC17	Q9NP64	241 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	SLCO1B3	Q9NPD5	702 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	IL26	Q9NPH9	171 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	HMG20B	Q9P0W2	317 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CLCF1	Q9UBD9	225 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ATP6V1H	Q9UI12	483 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TDRKH	Q9Y2W6	561 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	LTBP4	Q8N2S1	1624 aa		0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	PRRC2B	Q5JSZ5	2229 aa	Known RBP	0.6	□□□□□ -2.31
ARRDC3-204	ENST00000507075	IGHV5-10-1	A0A0J9YXX1	117 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	RBMY1B	A6NDE4	496 aa	Known RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	RBMY1E	A6NEQ0	496 aa	Known RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ARHGAP42	A6NI28	874 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	UBXN8	O00124	270 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	DCTN6	O00399	190 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	UGT1A9	O60656	530 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	BCAS1	O75363	584 aa	Predicted RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	RBMY1D	P0C7P1	496 aa	Known RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ATP5D	P30049	168 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CALCR	P30988	508 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	RDX	P35241	583 aa	Known RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CYLC1	P35663	651 aa	Predicted RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CYB561	P49447	251 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	DAP3	P51398	398 aa	Known RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	PRRX1	P54821	245 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	NAPA	P54920	295 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ASPH	Q12797	758 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TTLL9	Q3SXZ7	439 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	FAM78A	Q5JUQ0	283 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	GPRC6A	Q5T6X5	926 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	CES3	Q6UWW8	571 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	NLRP9	Q7RTR0	991 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	SLC26A11	Q86WA9	606 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ZNF664	Q8N3J9	261 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	DHRSX	Q8N5I4	330 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	NECAP1	Q8NC96	275 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075		Q8NDZ9	215 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	C1orf64	Q8NEQ6	169 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	GIPC3	Q8TF64	312 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	HTR3C	Q8WXA8	447 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	HPDL	Q96IR7	371 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	TM2D3	Q9BRN9	247 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	ATG10	Q9H0Y0	220 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	LHX5	Q9H2C1	402 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	LINC00597	Q9H2U6	94 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	WDR76	Q9H967	626 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	AATF	Q9NY61	560 aa	Known RBP eCLIP	0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	KCNIP1	Q9NZI2	227 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	IL20RA	Q9UHF4	553 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	COPS3	Q9UNS2	423 aa		0.59	□□□□□ -2.31
ARRDC3-204	ENST00000507075	KMT2B	Q9UMN6	2715 aa	Predicted RBP	0.59	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PTPRT	O14522	1441 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	IGKV1D-8	A0A087WSZ0	117 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075		A0A1B0GUS0	222 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GOSR1	O95249	250 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	STAMBP	O95630	424 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ALDOB	P05062	364 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	CSF3	P09919	207 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR56A5	P0C7T3	313 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	GKN3P	P0CG01	181 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	RBMY1A1	P0DJD3	496 aa	Known RBP	0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PRPS2	P11908	318 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	PRDX6	P30041	224 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	TNNT3	P45378	269 aa	Predicted RBP	0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	HSD17B7	P56937	341 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	KRTAP12-1	P59990	96 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	REG3A	Q06141	175 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	MAPK6	Q16659	721 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ZBED5	Q49AG3	693 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	FAM133B	Q5BKY9	247 aa	Known RBP	0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ETFRF1	Q6IPR1	90 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	LCN12	Q6JVE5	192 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	UNQ9165/PRO28630	Q6UXU0	137 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	HSDL2	Q6YN16	418 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	ATP6V0D2	Q8N8Y2	350 aa		0.58	□□□□□ -2.32
ARRDC3-204	ENST00000507075	OR9A2	Q8NGT5	310 aa		0.58	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms