RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 GPR171O14626 319 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 FMO6PO60774 539 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 EPXP11678 715 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 TNFRSF1BP20333 461 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 KDELR2P33947 212 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 GSK3BP49841 420 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 SLC16A1P53985 500 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 CDH12P55289 794 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 MXRA7P84157 204 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 H3F3AP84243 136 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-209ENST00000506630 PDK3Q15120 406 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF613Q6PF04 617 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 C5orf46Q6UWT4 87 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 GPAT4Q86UL3 456 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 CARM1Q86X55 608 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 P3H2Q8IVL5 708 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF100Q8IYN0 542 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 KTI12Q96EK9 354 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-209ENST00000506630 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
TCOF1-209ENST00000506630 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 DACH2Q96NX9 599 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 KCTD14Q9BQ13 255 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-209ENST00000506630 MED18Q9BUE0 208 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 ARL8BQ9NVJ2 186 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 TAGLN3Q9UI15 199 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 PRSS50Q9UI38 385 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 TESMINQ9Y4I5 508 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 IGKV1D-42A0A075B6H8 117 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 A0A087WUJ7 227 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CXCR6O00574 342 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CASKO14936 926 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CHP2O43745 196 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 OR2T1O43869 369 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 SHOX2O60902 331 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ATE1O95260 518 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 HEXAP06865 529 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 EDNRAP25101 427 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 HOXC12P31275 282 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 OR3A2P47893 321 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 PCYT1AP49585 367 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
TCOF1-209ENST00000506630 FAM69AQ5T7M9 428 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ANKRD34AQ69YU3 496 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CASP12Q6UXS9 341 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 STAC2Q6ZMT1 411 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 DEF8Q6ZN54 512 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CXorf67Q86X51 503 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ANKS4BQ8N8V4 417 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 CCDC197Q8NCU1 140 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 MFSD8Q8NHS3 518 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ADAMTS16Q8TE57 1224 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 FAM162AQ96A26 154 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 WFIKKN1Q96NZ8 548 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 EPYCQ99645 322 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 HEATR1Q9H583 2144 aaKnown RBP11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ABCD2Q9UBJ2 740 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 ADAM21Q9UKJ8 722 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 FLVCR1Q9Y5Y0 555 aa11.61□□□□□ -0.55
TCOF1-209ENST00000506630 TRAPPC13A5PLN9 417 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 FTCDNL1E5RQL4 147 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 MRPL33O75394 65 aaKnown RBP11.6□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF682O95780 498 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 ADAP00813 363 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 IGHV3-9P01782 118 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 CBLP22681 906 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 IL32P24001 234 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 OR1E2P47887 323 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 TAS2R41P59536 307 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 IL1RL1Q01638 556 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 POU4F3Q15319 338 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 TSC22D1Q15714 1073 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 SHEQ5VZ18 495 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 TMEM225Q6GV28 225 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 GABRG1Q8N1C3 465 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 UBE2J2Q8N2K1 259 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 LZICQ8WZA0 190 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 TAAR8Q969N4 342 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 APH1AQ96BI3 265 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 ACTR6Q9GZN1 396 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF226Q9NYT6 803 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 SLC7A7Q9UM01 511 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
TCOF1-209ENST00000506630 M0R082 166 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 KPNA4O00629 521 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 ARHGEF9O43307 516 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 GOSR1O95249 250 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 NCK1P16333 377 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 PSMB1P20618 241 aaKnown RBP11.59□□□□□ -0.55
TCOF1-209ENST00000506630 GRPRP30550 384 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 P2RY4P51582 365 aa11.59□□□□□ -0.55
TCOF1-209ENST00000506630 SELENOWP63302 87 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms