RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 HAUS5O94927 633 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TGDSO95455 350 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PSMG1O95456 288 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 OXSR1O95747 527 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 NGFRP08138 427 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SBK2P0C263 348 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 FRMD6-AS1P0C7T7 363 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 UROSP10746 265 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 BCKDHAP12694 445 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PRKCAP17252 672 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PAX7P23759 505 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GABRB3P28472 473 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SPRP35270 261 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 KRT20P35900 424 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 EIF1P41567 113 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 DIO1P49895 249 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 HNMTP50135 292 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF41P51814 821 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ARFIP1P53367 373 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TAS2R39P59534 338 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ATP6V0D1P61421 351 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PSPHP78330 225 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 MRPS22P82650 360 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CDKL1Q00532 357 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GUCY2DQ02846 1103 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GALNT1Q10472 559 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SELENBP1Q13228 472 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 FAT1Q14517 4588 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 FASTKD3Q14CZ7 662 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TBCCQ15814 346 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PCGF3Q3KNV8 242 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GLE1Q53GS7 698 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ESCO2Q56NI9 601 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 FBXO48Q5FWF7 155 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SLC25A53Q5H9E4 307 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 HP1BP3Q5SSJ5 553 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TEX35Q5T0J7 233 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SLC48A1Q6P1K1 146 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PAQR6Q6TCH4 344 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CBLN3Q6UW01 205 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 BTNL3Q6UXE8 466 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CASP12Q6UXS9 341 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF572Q7Z3I7 529 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 MTDHQ86UE4 582 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 MDP1Q86V88 176 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZC3HC1Q86WB0 502 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF575Q86XF7 245 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CCDC103Q8IW40 242 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 DDIASQ8IXT1 998 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 Q8N1X5 172 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GATSQ8NAP1 163 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ATP6V1C2Q8NEY4 427 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 OR7G3Q8NG95 312 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 OR2T6Q8NHC8 308 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CEP70Q8NHQ1 597 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 HUS1BQ8NHY5 278 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 FBXO25Q8TCJ0 367 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 GATAD2BQ8WXI9 593 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CCL17Q92583 94 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 DPF1Q92782 380 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 RGMAQ96B86 450 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CMTM7Q96FZ5 175 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SH3YL1Q96HL8 342 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 MAELQ96JY0 434 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ARL5BQ96KC2 179 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF317Q96PQ6 595 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CENPKQ9BS16 269 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SSBP3Q9BWW4 388 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TBL1XR1Q9BZK7 514 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SIRPDQ9H106 197 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 RANBP3Q9H6Z4 567 aaPredicted RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 SAP30LQ9HAJ7 183 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 POPDC3Q9HBV1 291 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CRLF2Q9HC73 371 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 B3GNT2Q9NY97 397 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 NUDT4Q9NZJ9 180 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 EMC3Q9P0I2 261 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 CTNNAL1Q9UBT7 734 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF346Q9UL40 294 aaKnown RBP2.72□□□□□ -1.97
TCOF1-208ENST00000506063 LRCH1Q9Y2L9 728 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 HIF3AQ9Y2N7 669 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 PCDHA9Q9Y5H5 950 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 TEX264Q9Y6I9 313 aa2.72□□□□□ -1.97
TCOF1-208ENST00000506063 A0A087WUV0 522 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 A0A1W2PPW3 197 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GXYLT2A0PJZ3 443 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CCDC189A1A4V9 331 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ANKRD61A6NGH8 418 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NCF1BA6NI72 391 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 FAM159BA6NKW6 160 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 NCF1CA8MVU1 366 aaPredicted RBP2.71□□□□□ -1.98
TCOF1-208ENST00000506063 P2RY10O00398 339 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 GPR171O14626 319 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PLOD3O60568 738 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 IGHV1-46P01743 117 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 PF4P02776 101 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 MT-ND5P03915 603 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 CHRM4P08173 479 aa2.71□□□□□ -1.98
TCOF1-208ENST00000506063 ABHD2P08910 425 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms