RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NOX3Q9HBY0 568 aa5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 CRLF2Q9HC73 371 aa5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 GMPR2Q9P2T1 348 aaKnown RBP5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 PSMC3IPQ9P2W1 217 aaPredicted RBP5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 OSGIN1Q9UJX0 560 aa5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 FBXO9Q9UK97 447 aaPredicted RBP5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 TRAPPC4Q9Y296 219 aa5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 PPIAL4AQ9Y536 164 aa5.95□□□□□ -1.46
NPIPB3-203ENST00000504841 NUP214P35658 2090 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 IGHV2OR16-5A0A0B4J2B6 119 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 TMEM129A0AVI4 362 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 AQP7P3A6NL99 342 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 SMIM23A6NLE4 172 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF208O43345 1280 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PPIHO43447 177 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 BCL10O95999 233 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PNPP00491 289 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 IGLV1-44P01699 117 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 TFP02787 698 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 HPXP02790 462 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 GPIP06744 558 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 CHRNGP07510 517 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ABHD2P08910 425 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ADRA2CP18825 462 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 FKBP2P26885 142 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ALDH3B1P43353 468 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 HTR3AP46098 478 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 SEC24CP53992 1094 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ARF1P84077 181 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PLAURQ03405 335 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 FUT5Q11128 374 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 DAG1Q14118 895 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 CCDC153Q494R4 210 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ELFN2Q5R3F8 820 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 C1QTNF12Q5T7M4 302 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PRAMEF8Q5VWM4 474 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PRAMEF7Q5VXH5 474 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 OR4F3Q6IEY1 312 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 FRRS1Q6ZNA5 592 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF771Q7L3S4 317 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ANKRD46Q86W74 232 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 GSPT2Q8IYD1 628 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 CADM2Q8N3J6 435 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 NATD1Q8N6N6 113 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ZIC4Q8N9L1 334 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 KIF18AQ8NI77 898 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 MZB1Q8WU39 189 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PMM1Q92871 262 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 MRPL24Q96A35 216 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 COQ8BQ96D53 544 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ZG16BQ96DA0 208 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 DUX5Q96PT3 197 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 PRPF18Q99633 342 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 SF3B5Q9BWJ5 86 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 GATA5Q9BWX5 397 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 TAPBPLQ9BX59 468 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 SUCNR1Q9BXA5 334 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 MRPL37Q9BZE1 423 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 NELFAQ9H3P2 528 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 OXSMQ9NWU1 459 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 CRNNQ9UBG3 495 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 REV1Q9UBZ9 1251 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 FZR1Q9UM11 496 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 CMAHPQ9Y471 501 aa5.94□□□□□ -1.46
NPIPB3-203ENST00000504841 TRAV20A0A0B4J274 112 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 A0A1W2PPW3 197 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ZNF503-AS2A6NEH8 195 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CFAP73A6NFT4 308 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 LIPT2A6NK58 231 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 RIPK2O43353 540 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 SYNGR3O43761 229 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CDC14BO60729 498 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 LYPLA1O75608 230 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 URI1O94763 535 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MPZL1O95297 269 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CPSF4O95639 269 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 AGR2O95994 175 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 IGKV3-15P01624 115 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CHRM4P08173 479 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ARAFP10398 606 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 G6PDP11413 515 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 UQCRBP14927 111 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CBR1P16152 277 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 PRPS1L1P21108 318 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 COL8A2P25067 703 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CHI3L1P36222 383 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 KHKP50053 298 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ARFIP2P53365 341 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 CLDN17P56750 224 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ETF1P62495 437 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 UBA52P62987 128 aaKnown RBP5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 KCNJ10P78508 379 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MVKQ03426 396 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 BNIP2Q12982 314 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 PCLAFQ15004 111 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 MSMPQ1L6U9 139 aa5.93□□□□□ -1.46
NPIPB3-203ENST00000504841 ALKBH6Q3KRA9 238 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms