RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 HNRNPCL1O60812 293 aaKnown RBP11.48□□□□□ -0.57
DDX41-204ENST00000504807 UPK3AO75631 287 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 LY6HO94772 140 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 HNRNPCL4P0DMR1 293 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 CXCR1P25024 350 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
DDX41-204ENST00000504807 AQP5P55064 265 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 ZNF311Q5JNZ3 666 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 C1orf140Q5VVS0 124 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
DDX41-204ENST00000504807 P2RY8Q86VZ1 359 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
DDX41-204ENST00000504807 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 ATP6V1G3Q96LB4 118 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 ZNF385DQ9H6B1 395 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 NGBQ9NPG2 151 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 CCDC167Q9P0B6 97 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 SLC9A8Q9Y2E8 581 aa11.48□□□□□ -0.57
DDX41-204ENST00000504807 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 A8MVM7 634 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 GPRIN2O60269 458 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 TMCC2O75069 709 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 FZD7O75084 574 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 ERLIN1O75477 346 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 LGI1O95970 557 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 GPIP06744 558 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 ARAFP10398 606 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 PNMTP11086 282 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 CDH2P19022 906 aaPredicted RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 FKBP2P26885 142 aaKnown RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 TTKP33981 857 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 RPS5P46782 204 aaKnown RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 TUBA1BP68363 451 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 TUBA4AP68366 448 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 SELPLGQ14242 412 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 GNA13Q14344 377 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 DLEU7Q6UYE1 221 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 AAED1Q7RTV5 226 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 GPAT4Q86UL3 456 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 ZNF440Q8IYI8 595 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 SPDL1Q96EA4 605 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 ALKBH3Q96Q83 286 aaPredicted RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 CPPED1Q9BRF8 314 aaPredicted RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 NAA11Q9BSU3 229 aaPredicted RBP11.47□□□□□ -0.57
DDX41-204ENST00000504807 CACNG6Q9BXT2 260 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 CALML5Q9NZT1 146 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
DDX41-204ENST00000504807 IGHV1-18A0A0C4DH31 117 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 HPRP00739 348 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 NCF2P19878 526 aaPredicted RBP11.46□□□□□ -0.57
DDX41-204ENST00000504807 CBLP22681 906 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 MST1LQ2TV78 715 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 PHYHD1Q5SRE7 291 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 SLC22A25Q6T423 547 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 C6orf89Q6UWU4 347 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 TMEM108Q6UXF1 575 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 TSPYL5Q86VY4 417 aaPredicted RBP11.46□□□□□ -0.57
DDX41-204ENST00000504807 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 BBS10Q8TAM1 723 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 TAAR8Q969N4 342 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 SF3B5Q9BWJ5 86 aaKnown RBP11.46□□□□□ -0.57
DDX41-204ENST00000504807 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 UPB1Q9UBR1 384 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 GMEB1Q9Y692 573 aa11.46□□□□□ -0.57
DDX41-204ENST00000504807 LRRN3E7EW58 273 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 POLR3GO15318 223 aaPredicted RBP11.45□□□□□ -0.58
DDX41-204ENST00000504807 SSX4O60224 188 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 ZNF432O94892 652 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 HLA-DOBP13765 273 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 PTAFRP25105 342 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 CFPP27918 469 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 MPGP29372 298 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 AQP1P29972 269 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 MAP2K6P52564 334 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 LARS2Q15031 903 aaKnown RBP11.45□□□□□ -0.58
DDX41-204ENST00000504807 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 AGKQ53H12 422 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 GCNT6Q5T4J0 391 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 PRAMEF8Q5VWM4 474 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 PRAMEF7Q5VXH5 474 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 NHLRC1Q6VVB1 395 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 ZNF525Q8N782 197 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
DDX41-204ENST00000504807 OR4D11Q8NGI4 311 aa11.45□□□□□ -0.58
DDX41-204ENST00000504807 OR1K1Q8NGR3 316 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms