RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 FAM71E1Q6IPT2 247 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KLC3Q6P597 504 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 Q6ZPA2 131 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TMPPEQ6ZT21 453 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 GPRIN3Q6ZVF9 776 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 GPAT4Q86UL3 456 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 MDP1Q86V88 176 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 P2RY8Q86VZ1 359 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 GAS2L3Q86XJ1 694 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 WDFY1Q8IWB7 410 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CNPY4Q8N129 248 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CLEC4FQ8N1N0 589 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CDRT4Q8N9R6 151 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ICA1LQ8NDH6 482 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 C1orf162Q8NEQ5 155 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 OR4M2Q8NGB6 313 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 OR1K1Q8NGR3 316 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ZNF563Q8TA94 476 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PIGXQ8TBF5 258 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ACTRT2Q8TDY3 377 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 NEU4Q8WWR8 484 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 RAB8BQ92930 207 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 DVL3Q92997 716 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 ERP27Q96DN0 273 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 ZHX1-C8orf76Q96EF9 292 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 KTI12Q96EK9 354 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 AURKBQ96GD4 344 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 PBKQ96KB5 322 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 DOK1Q99704 481 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 THUMPD3Q9BV44 507 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 KATNB1Q9BVA0 655 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 NELFAQ9H3P2 528 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SERHL2Q9H4I8 314 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 MARCH7Q9H992 704 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 BRF2Q9HAW0 419 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 C3orf14Q9HBI5 128 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 CRLF2Q9HC73 371 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 UBQLN4Q9NRR5 601 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 SIRT3Q9NTG7 399 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 ACSS1Q9NUB1 689 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 ERVK13-1Q9NX77 482 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 GIMAP2Q9UG22 337 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 OPN4Q9UHM6 478 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 FBXO9Q9UK97 447 aaPredicted RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 PPP2R2CQ9Y2T4 447 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 TNPO3Q9Y5L0 923 aaKnown RBP3.1□□□□□ -1.91
USP46-205ENST00000504078 FLVCR1Q9Y5Y0 555 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 PLCE1Q9P212 2302 aa3.1□□□□□ -1.91
USP46-205ENST00000504078 IGKV3D-15A0A087WSY6 115 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 A0A1W2PQD3 144 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ZNF587BE7ETH6 402 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 STX16-NPEPL1H3BU86 382 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CCDC188H7C350 402 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 STX16O14662 325 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ZNF264O43296 627 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ZNF500O60304 480 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 UPK3AO75631 287 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RP2O75695 350 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 AKR7A3O95154 331 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ZNF205O95201 554 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CSTAP01040 98 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 IGHV2-5P01817 119 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 KRT6AP02538 564 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 PLA2G1BP04054 148 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 KRT6BP04259 564 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 HMGN2P05204 90 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 NGFRP08138 427 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SBK3P0C264 359 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 IGHV4-38-2P0DP08 117 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CD79AP11912 226 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MAKP20794 623 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 PTMSP20962 102 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ACHEP22303 614 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 PRTN3P24158 256 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MPGP29372 298 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 TYK2P29597 1187 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 STX2P32856 288 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 MAGEA8P43361 318 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 KRT6CP48668 564 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 RAG2P55895 527 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SEC61A1P61619 476 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 CSNK2A1P68400 391 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 PSPHP78330 225 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 IL13RA1P78552 427 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 CCL8P80075 99 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 ROR2Q01974 943 aaKnown RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 CLCQ05315 142 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 DBPQ10586 325 aaPredicted RBP3.09□□□□□ -1.91
USP46-205ENST00000504078 CBFBQ13951 182 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 DAG1Q14118 895 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 RASA2Q15283 850 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SLC9A3R2Q15599 337 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 OR7A5Q15622 319 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 GPR68Q15743 365 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 FAM189A2Q15884 450 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 SPDYE7PQ495Y7 208 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 VPS26BQ4G0F5 336 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 UNC50Q53HI1 259 aa3.09□□□□□ -1.91
USP46-205ENST00000504078 KLF17Q5JT82 389 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms