RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TM6SF2Q9BZW4 377 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TSPAN10Q9H1Z9 355 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 OR10A4Q9H209 315 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZFYVE1Q9HBF4 777 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 DDIT4Q9NX09 232 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GPR83Q9NYM4 423 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 VSX1Q9NZR4 365 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 PLEKHB1Q9UF11 243 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 TESQ9UGI8 421 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 MEMO1Q9Y316 297 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SF3B6Q9Y3B4 125 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 KCTD3Q9Y597 815 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MMP24Q9Y5R2 645 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZDBF2Q9HCK1 2354 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TRAV1-2A0A0B4J238 106 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 A0A0B4J2A0 478 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LOC102723532A0A0G2JNH3 316 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MYADML2A6NDP7 307 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ANXA2P2A6NMY6 339 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR2AT4A6NND4 320 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 KDM4EB2RXH2 506 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 M0QYT0 321 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 M0R143 59 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MFNGO00587 321 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ITGA5P08648 1049 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SDC1P18827 310 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GABRR1P24046 479 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SDHAP31040 664 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ADPRHP54922 357 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 IRF9Q00978 393 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SPIBQ01892 262 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF234Q14588 700 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PTGES3Q15185 160 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 GSG1Q2KHT4 349 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ZNF311Q5JNZ3 666 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR2B11Q5JQS5 317 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OLFML2AQ68BL7 652 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TSSK4Q6SA08 328 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GLDNQ6ZMI3 551 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 NLRC3Q7RTR2 1065 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LRRC70Q7Z2Q7 622 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ADCK2Q7Z695 626 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GALNT5Q7Z7M9 940 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SYS1Q8N2H4 156 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NETO2Q8NC67 525 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 DMBX1Q8NFW5 382 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR52N2Q8NGI0 321 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ADAMTS17Q8TE56 1095 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 DUSP19Q8WTR2 217 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 THEM6Q8WUY1 208 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TMEM190Q8WZ59 177 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 S100A16Q96FQ6 103 aaKnown RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 HBEGFQ99075 208 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MAP3K3Q99759 626 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 BCL2L14Q9BZR8 327 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 COMMD4Q9H0A8 199 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CERS4Q9HA82 394 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 IL23AQ9NPF7 189 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LUZP4Q9P127 313 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 DNAJB11Q9UBS4 358 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SHPKQ9UHJ6 478 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SLC25A13Q9UJS0 675 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SERTAD3Q9UJW9 196 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OTOGQ6ZRI0 2925 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MGAQ8IWI9 3026 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 FXYD6-FXYD2A0A087WZ82 144 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 SMCO3A2RU48 225 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MEGF11A6BM72 1044 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR6C68A6NDL8 312 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TVP23AA6NH52 213 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 A6NIZ1 184 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 YJEFN3A6XGL0 299 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 A8MUA0 341 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 H7C417 338 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NDUFB6O95139 128 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OPN1MWP04001 364 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 ALDOBP05062 364 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 HEXBP07686 556 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 USP17L7P0C7H9 530 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 LINC00032P0C843 101 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OPN1MW2P0DN77 364 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OPN1MW3P0DN78 364 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 HKR1P10072 659 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TPH1P17752 444 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NMBRP28336 390 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CNR2P34972 360 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GPX4P36969 197 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 MAGEB1P43366 347 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 OR1G1P47890 313 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 PRLHRP49683 370 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 IDH3GP51553 393 aaPredicted RBP2.56□□□□□ -2
NEDD4-204ENST00000503468 XKP51811 444 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 CDH12P55289 794 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 RAP1AP62834 184 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 H3F3AP84243 136 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 TLE4Q04727 773 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 POU4F2Q12837 409 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 MS4A13Q5J8X5 152 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 GCNT6Q5T4J0 391 aa2.56□□□□□ -2
NEDD4-204ENST00000503468 NKAIN2Q5VXU1 208 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms