RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GOLGB1Q14789 3259 aaKnown RBP4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 A0A1B0GUS0 222 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 FRG2CA6NGY1 282 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 DHRS7CA6NNS2 312 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 IDSB3KWA1 339 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 LYPD3O95274 346 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 ATP1B2P14415 290 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 HOXD10P28358 340 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CASP14P31944 242 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLC8A3P57103 927 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CDK16Q00536 496 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CD47Q08722 323 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLC10A7Q0GE19 358 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 BST2Q10589 180 aaKnown RBP4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 ASAH1Q13510 395 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 FCN2Q15485 313 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 QRICH1Q2TAL8 776 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLC22A10Q63ZE4 541 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 SERINC5Q86VE9 423 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR2A12Q8NGT7 310 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 PAQR8Q8TEZ7 354 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 AGAP11Q8TF27 550 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 SERAC1Q96JX3 654 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CCT8L2Q96SF2 557 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CHIAQ9BZP6 476 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR1A1Q9P1Q5 309 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 PISDQ9UG56 409 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 COPS3Q9UNS2 423 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 PLLPQ9Y342 182 aa4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 CAB39Q9Y376 341 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P3-201ENST00000502802 RGPD2P0DJD1 1756 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 UTRNP46939 3433 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 DISP2A7MBM2 1401 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 PPIP5K1Q6PFW1 1433 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 SSH2Q76I76 1423 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 CPDO75976 1380 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 CENPJQ9HC77 1338 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 A0A1W2PPE3 182 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 CDX4O14627 284 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 TBX6O95947 436 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 LALBAP00709 142 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 STSP08842 583 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 TROVE2P10155 538 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 MCF2P10911 925 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 FOLR2P14207 255 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 CAPN2P17655 700 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 GALP22466 123 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 ANXA13P27216 316 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 SHC1P29353 583 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 GCKP35557 465 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 KIR2DS2P43631 304 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 RPS14P62263 151 aaKnown RBP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 GK3PQ14409 553 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 BCL7AQ4VC05 210 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 CARD17Q5XLA6 110 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 ENPP6Q6UWR7 440 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 GPR65Q8IYL9 337 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 SPATA4Q8NEY3 305 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 OR52H1Q8NGJ2 320 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 RAPGEF5Q92565 580 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 NUS1Q96E22 293 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 RNF2Q99496 336 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 GFRA4Q9GZZ7 299 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 NCOR1P1Q9H4R4 102 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 ANKRD19PQ9H560 264 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 REEP4Q9H6H4 257 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 KLHL28Q9NXS3 571 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 IKZF2Q9UKS7 526 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 ABCG2Q9UNQ0 655 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 RGPD3A6NKT7 1758 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 RGPD4Q7Z3J3 1758 aa4.07□□□□□ -1.76
HMGB1P3-201ENST00000502802 USP54Q70EL1 1684 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 LRRC37A3O60309 1634 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLIT3O75094 1523 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 KIF26BQ2KJY2 2108 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 A0A075B6Q4 140 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 IGHV3-35A0A0C4DH35 117 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 IQANK1A0A1B0GTG1 560 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 SMIM28A0A1B0GU29 152 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 TCRBV9S1A1TA0A576 114 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 A8MXQ7 604 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CRYGBP07316 175 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PABPC4LP0CB38 370 aaKnown RBP4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CD1CP29017 333 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CRYBB2P43320 205 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 SLC25A1P53007 311 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PLK1P53350 603 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PKNOX1P55347 436 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 RPS8P62241 208 aaKnown RBP4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CXCL6P80162 114 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 CHRNB3Q05901 458 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 ENPEPQ07075 957 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 ASPHQ12797 758 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 VGLL4Q14135 290 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PPP1R7Q15435 360 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 DUSP7Q16829 419 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 TIMM50Q3ZCQ8 353 aa4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 PAN3Q58A45 887 aaKnown RBP4.06□□□□□ -1.76
HMGB1P3-201ENST00000502802 OLFML2AQ68BL7 652 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms